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Information for unigene UN11971

FASTA Sequence
Unigene ID: UN11971Length: 899 SSR 
CCAATACAATACACTTCATTTTATTTTACTTTTTGAAAGAATTTTTCCCAATACAGTACAAATACAAATACAAATACAAATAGTGC
GGTGTGTGTGTGACCCATAATAAGGAGTATACATATAACAACAATAAGCATACACCCACCATGTTGCATCATCGGTGAAGATGCTA
CACTAGGACACATAATAGGATCTTCTTCTTCTTCTTTTTTGGCTCATCAAACATAGTAAACCATGCCAACTTCAACGAGGCTAATG
TGAGGTATGTTGAGTGCTACCGCTGGCCCTCTGCAGTTCTTCCTCAGAAACGAGTACCCTATATCTATTATCATCTTCTTCACCCA
CGTCGATGATTTCCTTGCTTTCACATACGAATGTCCCATTACATATGCAACCCCTGCCTCTTTCGCCCCTATCAAATCCATTAGCT
CTTCCCTCACAGACGCCTCCATCCCGCGACTACTTGCCTCCGTTAACCCAAACGTCACCCTCCTTCTCCTCACTTGCCCCTCCTGA
TACTCTTCCTCGTAAACTGGCCTCAAACTCTGCAAGGTCATCGATTTGCTGCTTTGTCTCCCCGTCTCATCATTCTCCTCTACTTC
TGAAACCGTCAGGATTGAGTTTGACAGACTCTTGTCGCTACTTAACACCGCCATTCTCCCATCATATGATTGGTGGGACTCAGATG
CCGAAGATTGGACGTCCCCTGCTTCCATCTGGATGAACTCCGCTATGCTCTGTATCAACTGATTCTCAAAGTCCCCGTCCTCCCGT
TGAATGTCTTTGTACCCATACCTCACTATGCACCTGTACATACGATACGGCTTTGGGCATACACGCCCAACTAGGAAGCGTTCTTC
AGATATACATGTGGCACTGGCACTGATTTCACACAAACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884247 hypothetical protein ARALYDRAFT_477306 [Arabidopsis lyrata subsp. lyrata]8892e-093
NP_186854 Potassium transporter 4 [Arabidopsis thaliana]8873e-093
AAF19432 potassium transporter KUP3p [Arabidopsis thaliana]8703e-091
XP_002512807 Potassium transporter, putative [Ricinus communis]7063e-072
XP_002277453 PREDICTED: hypothetical protein [Vitis vinifera]7028e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q9LD18 Potassium transporter 48871e-094
Q8H3P9 Potassium transporter 75789e-059
Q942X8 Probable potassium transporter 25492e-055
Q5ZC87 Probable potassium transporter 34936e-049
Q9FE38 Potassium transporter 34774e-047

TrEMBL top hits (Blast detail)Scoree value
B9RGU8 Potassium transporter, putative7062e-072
B9IA73 Predicted protein6963e-071
B9GNF7 Predicted protein6847e-070
C5XH54 Putative uncharacterized protein Sb03g0451805852e-058
Q1T721 Potassium transporter5816e-058

Arabidopsis top hits (Blast detail)Scoree value
AT3G02050.1 KUP3 (K+ UPTAKE TRANSPORTER 3); potassium ion transmembrane transporter8889e-096
AT4G23640.1 TRH1 (TINY ROOT HAIR 1); potassium ion transmembrane transporter4783e-048
AT2G40540.1 KT2 (POTASSIUM TRANSPORTER 2); potassium ion transmembrane transporter4013e-039
AT2G40540.2 KT2 (POTASSIUM TRANSPORTER 2); potassium ion transmembrane transporter4013e-039
AT2G30070.1 ATKT1 (POTASSIUM TRANSPORTER 1); potassium ion transmembrane transporter2401e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
101  33%

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