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Information for unigene UN11984
| FASTA Sequence |
| Unigene ID: UN11984 | Length: 1120 |
| SNP | AAGTAGCATTGAACATATAATTTGATAAGATCTTTAGACTATCAAGTTCTCGGTAAATTCTGACAAAAAGTTTTCTAAAAATCCGA
TAATAGATAGAACAATGTGCATAAACACAAACTTAAAGTGGTTCCATCATTAGAACAGTAGGGAGTAAAACAAAAGGGACCTTCTT
GCTAATACATGTTTATATAATATTCCAATTTGTCGATAAAGCCTCGCAGATTCTTGAGATACAGTAGGCTGCGCTAAGAGGATACC
CTGAAATGGCCACAAAATCATCGATATAATCGCACTCTATTTTCCCGTGTGACATCGCACCGAGCACAAAAACAGTGTCGGTCTCA
TTACAGACAGTAGATAGGTGCTTCTGCATGTTGACCAGCTTCTCAGAGCTATACGAGAACCCTATTTTTCTACAGTTAGGCGGAAG
GTGGCTTGTAACAGGGTTCTTGATCACCCTCATAAGTTTCTCACGCTTCCCAGATGCACTAATGCTAAGCTTCTGTAGCAATTGCA
ACATGATTCCAGCGAAACGCTTGAAAGTTCTTGGTATACGAACATGTGGCTTAACTTCAAAAAGAACACCTTGCTCTGTTCTAACA
TACACCGCTTTCAACCTCCCAGCCTTGTTGACCGGACTATCCAAAATCATTAATAGAGCCTGGTGAGTGATGTCTGGCCTGTAATG
AGCAGGATCTCTGCCATTCTTCCTCAAGAAATTAGCATGATCATCAGAGTTCAGTAGCTGGTAAGTCTTTCCAACTTTGGCAACTT
CGAGAGAGGCCTTCTCAAGCACAAAAATAACACCAGTCTGGTCCTTCTTATTACCAGACACGACAATAGGTATTCCCACATCAAGC
TCATCTGCTGCTTCCTCAGCTCTCTCGTTCTCTTCATCATCTTCCTCCTCTGCATTTGAGGTGGCTTCTTCTCTCTTAGCTTTCTT
CACTTCTTTTCGTTTCTGCTCAAACTTAGGCTGCTCATCTTCTTCATCTTCTTCCTTATCGTACCTCTCTCTTCTCTCCTTCAAAA
ATCAAAAATTGAGCTTGAGAAGATGATTCAGGTGAGCAGGCGACTGATTTGAATCTGTGCGGGGGAGGTTCCACTAGATAAACCCT
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM65530 unknown [Arabidopsis thaliana] | 1087 | 3e-116 |
| NP_191259 nucleolar essential protein-related protein [Arabidopsis thaliana] | 1081 | 1e-115 |
| XP_002531546 Nucleolar essential protein, putative [Ricinus communis] | 953 | 9e-101 |
| XP_002307982 predicted protein [Populus trichocarpa] | 928 | 7e-098 |
| ACU18608 unknown [Glycine max] | 876 | 8e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O35130 Probable ribosome biogenesis protein NEP1 | 546 | 6e-055 |
| Q92979 Probable ribosome biogenesis protein NEP1 | 543 | 1e-054 |
| Q9W4J5 Probable ribosome biogenesis protein NEP1 | 529 | 6e-053 |
| Q9P8P7 Nucleolar essential protein 1 | 514 | 3e-051 |
| Q06287 Essential for mitotic growth 1 | 508 | 2e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LA80 Putative uncharacterized protein | 1087 | 2e-116 |
| Q9M1J8 At3g57000 | 1081 | 9e-116 |
| B9SZX7 Nucleolar essential protein, putative | 953 | 6e-101 |
| B9H941 Predicted protein | 928 | 5e-098 |
| C6T9V6 Putative uncharacterized protein | 876 | 5e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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