Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN12001

FASTA Sequence
Unigene ID: UN12001Length: 1695 SSR 
GGGCTTCAAGAACCTTCCATTACACAGAAAAGGTACAAGTATCACAGGAACAAACTAAATATAACTAACCTTGGTGTTGTGTGTTC
CAATTAGTTACATGCACATATAAAATCCATATCCCACAAAAATATAACTCACAAATATAACAGAAGAAGAGATTTCATCACAAACT
TACAAGGACTCGTTAGTAAAAGGGATCTCTTGGAACTTGAAAGAAGCATTGCCCGCGTTCTCGCGTAACACATTCTCGTCATCCGC
CAATGGCATCACTTGTCTGTCACCGACCTGTCGCGGTGGCAATGCCTCTCGAACCCCTGAAAACTCCATCGAATCTAGCGTTTCGT
TACTAAACAACAAGTGGCTGCTGCTGCTCCTGGGCGGTGAGGAGAATGCAGCGGTAGCGGAGGAATCCCACAGAATGACGTGGAGG
ACGATGGAAACCTTTGCGTGACGGTGAAGCGATAGTTTCTGGCTGAGCGAAACGGTGTCGTAGCAGCGAATGGCTCCGGTTGAGGA
AACCATCCATGGCAATACCTTCTGGCTACCAACACGTGAAACCACCAGACGACGCGAAGCTTTGGCTGCTTCTCTGTATAATGAGC
TCAGGCCTGATCTTGCAGCTGGTGCACTCTCGTCATCGTGGTCCGTCACTGAAGAGACATAAATGAAACCCTCTTCAGTGCGGCTG
ATGGAGAACCCTAGTTTGGTGTCATCATCTCTGAGTTTGATTTCTAGTGGCAACTCAACGCCAAGAGGAGCATACCAAAGCCGAAC
CGCTCTGACCACACCAATATCAACTCCATGATAATCCTCAAACCCATAGAGACTCGCGTTTGCAAGATTCGATAGGTCAGAAAGTG
AAGTCGTATTAACTGTAGCTGAGGCAGTTTCTCCCGATATCTTGGTAAGCAAAGATTCAGTCTGAATATTCATGAAGACGATAGGA
ACGCCATTGGCTTGTGAACAGCTTAGCCAAGCATTTGCACGAGCAAGTGTGTCTTCCAAGTCGTTATACCGAGAACCAGCCCTTCC
ATAAGCAGAAGCTTTGGGAAGAAACAGAATGGAGAGGAAGTTGCTTGAGCCGGAGATTGGTAAGGCTTCTTGCATTCTTCTTTCCC
ATGGATATGAAACGTAACCATCTTGAAGCTTTACCCTCACCAATGCTTCCACCATTCTTGATCCTCTTGATGCTTGTATACCGAGG
CAATCCGACTCAGTCCGATCCGAGAACCCGACTGTATAATTCGGGTCATCAATGGATCTAAGCATGTACTGTTTTTTACCGGCGGA
ATCGTTAGGAACAATACAAGCAGACAGATCGGATAAATCGTGGGAGCCACGTCTGACTCTGACAACAATCGAAGTATCTTTGTTCC
TGTAAGAATTGTGTAAAACCTTCTGTAACCAAGCTTTACCTCCTTTAAACGGAGCCTTGAAAATAGCCGAACCGGGTCCTGAACCG
ATCCGAATTTCTTCGACTATGTCCCCGGTCTGAAGCATATCGCCGCTCCATTCGTCGCTGTTGGAGCTTCCTTTGAGACAGTCGAT
GGAGAGGACGACGGTGTTTCCGGGTCGGGTTGTGGTTTCGGGTTGGTGGGTGCGATCCATTGGCGATGTTCTCGGGTTTGCACGAG
AGAGAGAGAGAGACACAGAGACAAAGTAAGAGAAAGAAAAGAGCTTCGAAAATGTGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872642 hypothetical protein ARALYDRAFT_490026 [Arabidopsis lyrata subsp. lyrata]22372e-249
NP_567387 uncharacterized protein [Arabidopsis thaliana]22239e-248
AAM64931 unknown [Arabidopsis thaliana]22202e-247
CAB40948 putative protein [Arabidopsis thaliana]15141e-165
XP_002285555 PREDICTED: hypothetical protein [Vitis vinifera]14881e-162

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94B03 Putative uncharacterized protein At4g12070/F16J13_14022236e-248
Q8LB73 Putative uncharacterized protein22201e-247
Q9SZ72 Putative uncharacterized protein AT4g1207015141e-165
B9RI86 Putative uncharacterized protein14557e-159
C6TCU4 Putative uncharacterized protein14386e-157

Arabidopsis top hits (Blast detail)Scoree value
AT4G12070.1 unknown protein22242e-250

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
201  25%
 
181  25%

Unigene MembersMember information