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Information for unigene UN12018

FASTA Sequence
Unigene ID: UN12018Length: 802 SSR 
ACTCAAGAGTTTAGCTTCCATCAACATACAAAATGAACCATTCCAAAGCAAAATCCAGTAATAAACCAATAGAAAGAAACATGCAG
GCTCCATTTAACCTCAAGACTGAGAGTGTGGTGGGTAAGGTAGATTACAAAAGTTCTTTGGTGAAAATCTGTCAAAAGCACTGAGG
ATAGGGCTTGCCACATAGACATTGTTCAGAATGTGTAATTGACCTAAAACGTTTTGTGACGAAAATTGAAAGAAAAAGTAAGAAAC
CCCACGATAAAAGATAAGACGTATCAGTTATGCAAGCTCATGAAGCTTTGGTGTCAATTCCAACCGTCACTTTCATTCCCATTAGC
ACCGACCTGGGGAGGTTCTACCACAGCATGTGAGCTTCCTGTCGAATCCGGGAGCTGGATGGAATGGTCAAATCTACAAGCTGGGC
CAAATTTGCAGATGCCGTAGCGACTGTAATGTGTGCAGATGACTTGATCAGGCCTAAGGGGCAAGCCCTTGTCATTGAGAGCGTAA
GGAGGCTGTTTCGGCAAACGATTCTTAGGGTGATGGTATTTGCAAGTGAACTTGAACTTGATAATCCCCAGTTTTAAGATAGTAAC
TGCACTCAGGCTGGTCCGGACGTTCTGGAAACTCCTCAGCAGGTTTTTGATATTTGTATGGTGTGAAAATACTTGTTTCAGCTGAT
GAGTTGTTGTTGTTGTTCATAAGGTATGTGGTGGAAGTAGAGAACACAATCCTTTCTGATGGATACATAGTAGTAGCCTGATAGCC
ATTCCACTCGGGAGTTTGAGATGAAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190414 zinc finger CCCH domain-containing protein 43 [Arabidopsis thaliana]4429e-042
XP_002875904 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata]4429e-042
XP_002864843 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata]3773e-034
NP_201131 zinc finger CCCH domain-containing protein 67 [Arabidopsis thaliana]3675e-033
AAV66094 At5g63260 [Arabidopsis thaliana]3675e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q9STM4 Zinc finger CCCH domain-containing protein 434424e-043
Q5RJC5 Zinc finger CCCH domain-containing protein 673672e-034
Q3ECU8 Zinc finger CCCH domain-containing protein 132311e-018
Q2QT65 Zinc finger CCCH domain-containing protein 662231e-017
Q2R4J4 Zinc finger CCCH domain-containing protein 632167e-017

TrEMBL top hits (Blast detail)Scoree value
B9I3K6 Predicted protein3055e-026
B9IF40 Predicted protein3046e-026
B9RAN9 Nucleic acid binding protein, putative2787e-023
B7F3U0 Putative uncharacterized protein2232e-016
B8BP89 Putative uncharacterized protein2232e-016

Arabidopsis top hits (Blast detail)Scoree value
AT3G48440.1 zinc finger (CCCH-type) family protein4433e-044
AT5G63260.1 zinc finger (CCCH-type) family protein3681e-035
AT1G48195.1 zinc finger (CCCH-type) family protein2311e-019
AT5G16540.3 ZFN3 (ZINC FINGER NUCLEASE 3); DNA binding / nuclease/ nucleic acid binding2077e-017
AT5G16540.1 ZFN3 (ZINC FINGER NUCLEASE 3); DNA binding / nuclease/ nucleic acid binding2077e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
101  50%

Unigene MembersMember information