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Information for unigene UN12028
| FASTA Sequence |
| Unigene ID: UN12028 | Length: 1436 |
SSR | | AACCTTGAAGCAAGTTTCTTATTAATGGATAAAGAAGTTCTCTCTGCAATGAAACTAACCTCAACTGAAACAAAACTCCAGAGTGA
AAACTGAGTACAGACCAGACAGTTCAACTGTTCAACTACAAGCAAGTTTACTCAAAGGACCAAACACAAAACATATAGAGACTTGA
AAAAAAAAAAACAAAGCTACTAAATCACTGCTTCTCAGCTTTGTAACTAGACCCACGGACATTATCACAAACCATAGTAATCTACA
CCAATTTCAAGAGCAGACAGACCAAATGAGGAGCGGAAAGGAAAAGGTTTTCATGTCTGTGTCCCGTTTTAAAGCTGCACTTCTCT
GTCATGTATCCAGCTGAAAGGAATCTTGGGTCCTTTCTTGGCTCTTGCTTGAGCTCTCTCATCCAACCTCCTGATTCTCGGAGTCA
ACCCACATAAGTAGTCTTGTGCTTTGTTTCCTTCACCCGAAAGCCCGTTTAAGTTCTCAATCTTCCACCTCCCAACCAAAAACTCA
AGAATGTCCGCATAGTCTTTAGCAGTGTAAACACCGAGCCTCTGAGCCACTGAAGAGAAGTTGTCAAAGAGGTTGTCATCACGCCC
ATCGTACATCAAGTGAGCAGGCATTGAGATTTTCTTTCTCATCATGTCTGCAAACGCCATGACTGTACCATCAGGATCAATCTCAA
AGAGCTTCTCAACTATCTTGGTGTAAGCAGTCTCATGACGCTTCTCGTCTGCAGCTATTGTGCCACATATTTGGGCTAGCTTGAGG
TCTCCATGCTCTTTGGCATGGCGTGCTGTGTTTCCGTGAGAGACGAAGGTCGCTCTTTCTTGGAACGAAGTGTAGATGAAGCCAAG
GTAAGGATTGTTCTCTGTCCTTGGATCCTCATGTCAACACGACCAGACAAGGTGTTCAGCATTGTTTGATAGGTCGGAAGCGCTTC
TTCCGTGATCATGTCTCCCACCAGAACCACAAAGTAATCATCAGGGAGCTCTCTCGCCCTCTCTCTTAACTCTCTCACCTGATCTT
CGAACCCGTCGGATGCAGGGTCGGGTAAGAAGTCCTGGGGCTGCCACGACTTCTCCACGTCCTTGAGATGAGTGAGAAGGTTCTGC
TCGGCCCAGCCTTCCATAGATTTGAAGATCTCGATCTTCTGGGGTGGCATGGAGTGCAGGACTTGAACGTGCACTTCCTTTGGTGG
CGTAAATGGCTTCTTCAAAGTCTCAACCTCCTTGGAGGTGAGAGCCGGAGAAGAAGAAGCGAGGCAGAGGAACTTGGGAGATCTGA
AAGTAGAGATTGGCGGACGAGCCGAGGAAGGGAAGTTGTAAGGCTGAGATGCCAAAGGGTTAAGCTTCAATGCCATAATATCTTTT
GTGGATTCTTTCAGAGACAAGCGAGCTCTCTCTCTCTCTCTCTAAGGCTAATGCTCTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34062 unnamed protein product [Thellungiella halophila] | 953 | 1e-100 |
| ABS86960 delta-9-stearoyl-acyl-carrier-protein desaturase [Descurainia sophia] | 951 | 2e-100 |
| P29108 RecName: Full=Acyl-[acyl-carrier-protein] desaturase, chloroplastic; AltName: Full=Stearoyl-ACP desaturase; Flags: Precursor | 950 | 3e-100 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 948 | 5e-100 |
| XP_002880063 hypothetical protein ARALYDRAFT_903770 [Arabidopsis lyrata subsp. lyrata] | 947 | 6e-100 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 950 | 1e-101 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 944 | 6e-101 |
| P22243 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 886 | 3e-094 |
| Q96456 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 871 | 2e-092 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 869 | 3e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4X944 Acyl-[acyl-carrier-protein] desaturase | 951 | 2e-100 |
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 948 | 3e-100 |
| O22832 Acyl-[acyl-carrier-protein] desaturase | 946 | 6e-100 |
| Q09JZ0 Acyl-[acyl-carrier-protein] desaturase | 946 | 6e-100 |
| Q0WKW6 Acyl-[acyl-carrier-protein] desaturase (Fragment) | 946 | 6e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 947 | 2e-102 |
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 947 | 2e-102 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 781 | 4e-083 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 776 | 2e-082 |
| AT1G43800.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 705 | 3e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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