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Information for unigene UN12066
| FASTA Sequence |
| Unigene ID: UN12066 | Length: 1207 |
SSR | | GGAGAGAGAGAGATTCAATGGAGAGAGTGAATCAAACATTCTTCTTGTCGCATGGCTCTCCCACACTTAGCATTGATGATAAGTTA
GAAGCAAGACAGTTCTTCCAATCATGGTCGGACAAAGTCTTTCAACACAAACCCAAATCTATTTTAGTCATCTCTGCTCACTGGGA
CACCGAGTTTCCATCCGTCAACACTGTTCCCCGCAACTCCACCATCCACGATTTCAATAACTTCCCTGATCCCATGTACAAGGTCT
CTCTCTTCCTCTTTCTCACAAAAAAAACCCTAACTTTTGTAATCTTGATCCTCAAGTTTATCCTTCAAGAAATGCATCAATAGCTT
TATGTTTTACCAACTTGATTCTTGCAGCTTAAGTATGAAGCACCAGGAGCCGTTGAGCTGGCGAAAAGGGTTAGAGAGTTGCTAAT
GGGAGGAGGAGGAATGAAGCGTGTTGATGAAGATACAGAGAGAGGACTTGATCATGGAGCTTGGGTTCCTCTTATGTTGATGTATC
CTGAGGCAGATATACCGGTTTGTCAACTCTCTGTTCAATCATCTCAAACCGGGACTTACCATTACAACATGGGCAAAGCATTGGCT
CCACTGAAAGAATAAGGCGTTCTTATCATTGGATCTGGAAGTGCCACTCATAACTTGAAGAAGCTTGACTTTAGTATCACTGATGG
ATCAGCGGTTCCTTGGGCTTTAGATTTTGATCATTGGCTCAGAGACTCTCTCCTACAAGGAAGGTATGAAGATGTGAATGAGTGGG
AAGAGAAAGCTCCAAATGCGAAAATGGCACATCCATGGCCAGAGCATTTCTACCCATTACACGTTGCAATCGGTGCAGCTGGTGAT
GACGCCAAGGCAGAGCAAATCCACACAAGCGGGCAACTTGGGACTCTGTCTTATTCTTCTTATAGCTTCACTTCTTCCCTTTGAAA
CATTTCATCTTTACCTCCTTTCACTTGCCGTGTGACTACGTTAATGTAAGCACTGTGTATTTCACCTATCTCTAATAATCCAAATC
CTTCTATGCAAATACAGTCTCCTCTCTAATAATACATGTGAGAGACTTGGGTTGAGATACTCTCAATAGAGGATGCTCTAATGTAG
ATTGGTTTCTGTATAATATGGGATTCCCTTTGATGTATGAAAATTCCTAAAATGTTGTGTATATGACTGACTAATTTGGGTTTTGT
GGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567456 4,5-DOPA dioxygenase extradiol-like protein [Arabidopsis thaliana] | 903 | 6e-095 |
| XP_002870262 catalytic LigB subunit of aromatic ring-opening dioxygenase family [Arabidopsis lyrata subsp. lyrata] | 873 | 2e-091 |
| CAB10288 hypothetical protein [Arabidopsis thaliana] | 835 | 5e-087 |
| ACU22982 unknown [Glycine max] | 722 | 6e-074 |
| ADI85437 aromatic ring-opening extradiol dioxygenase, LigB family [Geobacter sulfurreducens KN400] | 404 | 5e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q949R4 4,5-DOPA dioxygenase extradiol-like protein | 903 | 3e-096 |
| Q7XA48 4,5-DOPA dioxygenase extradiol | 553 | 1e-055 |
| P24197 Uncharacterized protein ygiD | 268 | 1e-022 |
| O74741 4,5-DOPA dioxygenase extradiol-like protein | 126 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TJ92 Putative uncharacterized protein | 722 | 4e-074 |
| A5BGZ7 Putative uncharacterized protein | 713 | 5e-073 |
| A4JB46 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | 386 | 4e-035 |
| Q3K931 Putative aromatic ring dioxygenase | 383 | 9e-035 |
| Q0BIQ4 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | 379 | 3e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family | 904 | 2e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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