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Information for unigene UN12070

FASTA Sequence
Unigene ID: UN12070Length: 1787  SNP
GAGTCGGTTCGGGTTTCAATATACACCTCTCTAAAAATCGATTAATCGAAAACTTTTGACTCTCTTCTCTCTCTCGATCAATCGAT
TTTGGTTGATTCGTCTCCTTGATTTGGGAATTAGGGTTATTATCCGAAGATGACGACTGCAGCAAGGCCAACGTGGGCACCGGCCA
AGGGAGGTAACGAGCAGGGTGGTGCTCGTATCTTCGGCGCCTCTCAGAAGTATTCGTCTCGTGATGTCGCCGCTCATACAACTCTA
AAGCCTAGGAGGGAAGGGCAACACACTCAGGAGGAAGTGCAGAAGAAGAATCTTCGTGACGAGCTTGAAGAGCGTGAGAGGAGACA
CTTAGCTTCCAAAGACAAATCCTACAGTGATGATAGAGACCGCAGGAGAGGGAATCAGCTATTACTGGAAGGCTCTAAAAGGGACC
CTGAAGATCGGATTGTTCCTCGCAGTGTAGACGCTGATGATTCTGATGTTGATATCAAAAGTGACGATGAGGATGATAGTGATGAC
GAAAGTGACGATGATGAGGATGACACTGAAGCTCTTATGGCTGAACTCGACCAAATAAAGAAAGAAAGAATTGAGGAGAGGCTCAG
GAAGGAAAAACAGCAGCAGATGGAAGAGCTAAACGCCAAAGAAGAGGAGCTTCTCAAAGGAAACCCACTGCTTAACACCACTCCCA
CTTCGTTTAGTGTCAAAAGAAGGTGGGATGATGATGTGGTGTTCAAGAATCAGGCACGTGGAGAAATGAAAGCACCAAAGCGCTTC
ATCAATGATACAATCAGGAATGACTTCCACAGAAAGTTCCTACACAGATACATGAAGTGATTTGAACAAGAGTGTTATTTGTTGCT
AAGCCTCTTTATTCTGTCTGGGTTTATGTTGTCTCTTGTACTGATACTGAACCCAACTTCTTATTGTTTAATATAAAAAAAGCTTA
TGCGTTTGAATTTAATGCTATTTCTCAGATTTCTACTAGATTCTTATCTATCACTGACACCATTGGCACAAAACTGGAAATAGCCT
GATAGAGTCGTTTCTGATCTCTGTTACATATATTTTTGGTCTCTGCAGTTCTCACTTGTTCCTTTTCAAAGATGACAAATGCTTAT
TTTCTTGCGAAGGCAGAAGTATGTGCAAAGACGGTAGCCAAATGCCATGCCAAGCAGAACCCACAGTTCTTCTAGACCACCATTCA
AGTTAACTGTGTCGAAGGGTGATGAGCTCTGCAGTGTCCTGCAGCCGCCTTTGCTCGCACAATCGAAAACTTGGTCCCCTGTGTAC
TGAACTTTCAAAAGCAGTCTGAAGCCGTAGTGCATGAAGGACAAGTACTTCAGCCACTGCATGAACTTGGGTATGTGCTGAACATA
GTAACCTCCTGTTAGAAGAAACATCATTAGTACCCAAGAGGGGATCATACCAGCCCTCTTAATGCTCAACACCGAAGCTCCTAAGA
ACTCTCCTGCACCTTGGCTAGTTATGGCTATAAGTAGTATTGTCAACACGGTGAAAAGGAAGCAGGGGACTGTCCTACTGAACCCA
GCCATGAAGTAGACAATGATCATGAAGAATGTAGGGTACAAAACGTGTGCCACCATATCACATAGTGTACTGCATACGTAGTACAC
GCTTAGCCTGTACATGTCTGCTTTTCTTTCTTTCACCAGGTATATCTTCTCGAAGGGGAACACATAAACTGCTCCAAAGAGCGATG
AAGATGTCCAGAAGATGCAGATATAGAACATCAAACCAACTTGGTCTCTAAGTGTGCCTCTGTGTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884953 abc transporter family protein [Arabidopsis lyrata subsp. lyrata]11172e-119
XP_002882808 hypothetical protein ARALYDRAFT_478699 [Arabidopsis lyrata subsp. lyrata]11091e-118
AAM64310 unknown [Arabidopsis thaliana]11063e-118
Q9LK50 RecName: Full=ABC transporter G family member 26; Short=ABC transporter ABCG.26; Short=AtABCG26; AltName: Full=Putative white-brown complex homolog protein 27; Short=AtWBC2711037e-118
NP_187928 ABC-2 type transporter family protein [Arabidopsis thaliana]11037e-118

Swiss-Prot top hits (Blast detail)Scoree value
Q9LK50 ABC transporter G family member 2611033e-119
Q0VFP5 Protein CWC15 homolog5235e-052
Q9JHS9 Protein CWC15 homolog5219e-052
Q2KJD3 Protein CWC15 homolog5192e-051
Q9P013 Protein CWC15 homolog5173e-051

TrEMBL top hits (Blast detail)Scoree value
Q8LD33 Putative uncharacterized protein11062e-118
Q9LK52 Dbj|BAA90629.110991e-117
Q93XX6 Putative uncharacterized protein At3g13220; MJG19.1610945e-117
B9S9X8 ATP-binding cassette transporter, putative10112e-107
B9GFZ9 Predicted protein9862e-104

Arabidopsis top hits (Blast detail)Scoree value
AT3G13200.1 EMB2769 (EMBRYO DEFECTIVE 2769)11051e-120
AT3G13220.1 ABC transporter family protein11042e-120
AT1G31770.1 ABC transporter family protein4152e-040
AT4G27420.1 ABC transporter family protein4133e-040
AT5G06530.2 ABC transporter family protein3802e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  24%
 
117  41%
 
82  12%
 
103  18%
 
61  6%

Unigene MembersMember information