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Information for unigene UN12072
| FASTA Sequence |
| Unigene ID: UN12072 | Length: 841 |
SSR | | GGAAATTAAATAGACACAAGTGCGTGCGTGAACTTAGAGAGAGAGAGAGAGAGAGAGAGAGCTAAGCAGTAGAGATAAACAAACAT
CAATGGCGATTCCAATGCCAACTCGACAGCTATTCATCGACGGCGAGTGGAGAGAGCCAATCTTGAAGAATCGCATCCCCATCGTC
AATCCAGCTACCCAAGATGTCATTGGTGATATCCCGGGGGCAACAAAGGAGGATGTGGAAGTAGCAGTCAACGCTGCTCGAAGAGC
TTTCTCAAGGAACAAAGGTAAAGACTGGTCCAAAGCATCAGGAGCTCTTCGCGCCAAGTATCTACGCGCTATTGCTGCTAAGGTGA
CTGAAAGGAAGTCGCATCTGGCAACGCTTGAGTCGCTTGACTCTGGTAAACCTTTGGATGAAACTCTTTGGGATATGGAGGATGTT
GCTGGATGTTTTGAGTTTTATGCTGACCTTGCTGAAGGATTAGATGCTAAGCAGAAAGCTCCTGTTTCTCTTTCCATGGAGAGTTT
TAAGAGTTATGTTCTCAAGCAACCTCTTGGAGTTGTGGGACTCATCACACCTTGGAATTACCCTCTTCTGATGGCTGTTTGGAAGG
TGGCTCCTTCGCTTGCTGCTGGATGTACTGCCGTTCTCAAGCCATCAGAGCTCGCTTCTGTCACTTGTTTGGAGCTTGCTGATATT
TGTCGTGAGGTTGGTCTTCCTCCTGGTGTTCTTAACGTTCTTACTGGATATGGTTCGGAAGCTGGTGCTCCTTTGGCTTCACATCC
CAATGTCGACAGATTGCTTTTACCGGAAGTTTGCCACGGGAAGCAAGTCATGACATCTGCTGCTCAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAV67891 betaine-aldehyde dehydrogenase [Chorispora bungeana] | 1127 | 4e-121 |
| NP_565094 betaine aldehyde dehydrogenase 1 [Arabidopsis thaliana] | 1117 | 5e-120 |
| XP_002889000 ALDH10A8 [Arabidopsis lyrata subsp. lyrata] | 1097 | 1e-117 |
| XP_002322147 predicted protein [Populus trichocarpa] | 1040 | 5e-111 |
| XP_002318630 predicted protein [Populus trichocarpa] | 1038 | 8e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S795 Betaine aldehyde dehydrogenase 1, chloroplastic | 1117 | 2e-121 |
| Q9STS1 Betaine aldehyde dehydrogenase 2, mitochondrial | 1014 | 2e-109 |
| O04895 Betaine aldehyde dehydrogenase, chloroplastic | 977 | 4e-105 |
| P28237 Betaine aldehyde dehydrogenase, chloroplastic | 942 | 5e-101 |
| P17202 Betaine aldehyde dehydrogenase, chloroplastic | 929 | 2e-099 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5Q033 Betaine-aldehyde dehydrogenase | 1127 | 3e-121 |
| B9IEL4 Predicted protein | 1040 | 3e-111 |
| B9I351 Predicted protein | 1038 | 5e-111 |
| Q6V4W9 Betaine aldehyde dehydrogenase | 1012 | 6e-108 |
| B2BBY6 Betaine-aldehyde dehydrogenase | 1009 | 1e-107 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G74920.1 ALDH10A8; 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase | 1117 | 2e-122 |
| AT3G48170.1 ALDH10A9; 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase | 1014 | 2e-110 |
| AT3G24503.1 ALDH2C4; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD)/ coniferyl-aldehyde dehydrogenase | 413 | 1e-040 |
| AT3G48000.1 ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD) | 375 | 2e-036 |
| AT1G79440.1 ALDH5F1; 3-chloroallyl aldehyde dehydrogenase/ NAD or NADH binding / succinate-semialdehyde dehydrogenase | 373 | 4e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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