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Information for unigene UN12079
| FASTA Sequence |
| Unigene ID: UN12079 | Length: 638 |
SSR | | GGGTTGTGACTGATTGATTGATTGATTGATTCATCGTCCCTTCTTCTCTCGGGTTGGGGACTTAACGAAGCCGAAATACGAAAACC
CTAGAAAGAAAAGACCTTGTGGGGTTTGTTACTTGAGATCATCGACGAAGATGCAACTAACTCTCGAATTCGGGGGTGGTTTAGAG
CTTCTCTGTGATTCTGAGAAGATCCATAAAGTAAACGTCGATTTGCCCCATGGAGCAGATGAGTTAACAATGAAGCATTTGCTATC
GTGGGTTCGCACAAATGTGATCAAAGAGAGGCCTGAGATGTTCATCAAGGGAGATACTGTGAGACCTGGTGTTCTTGTGCTTGTGA
ATGACTGTGATTGGGAGCTTAGCGGTCAGCTCGAGACCACAATTGAAGACAAAGATGTTATCGTTTTCATCTCCACATTGCACGGT
GGATAAAAAAAAAATCATAGCTGTGTGGATCATCATCATCACACAAGAACCTTTTTTAACTATCTATGTTCTTCACTTCTGTTATG
TAATCTCTGCAACTAATGAATGGGAAACAAACTGATAAATGTGATTTCCACATAAATCTCAATACACTATTTGTGGCAAGCAGACC
CAAGACTTTGATATGAGGAAAACATTTCGTGAGACC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_001078064 ubiquitin-related modifier 1-1 [Arabidopsis thaliana] | 479 | 3e-046 |
| ABK28333 unknown [Arabidopsis thaliana] | 479 | 3e-046 |
| NP_001118872 ubiquitin-related modifier 1-2 [Arabidopsis thaliana] | 449 | 9e-043 |
| XP_002511777 Protein C9orf74, putative [Ricinus communis] | 445 | 3e-042 |
| XP_002278537 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 433 | 6e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A0MDQ1 Ubiquitin-related modifier 1 homolog 1 | 479 | 1e-047 |
| B3H7G2 Ubiquitin-related modifier 1 homolog 2 | 449 | 4e-044 |
| B6SXH2 Ubiquitin-related modifier 1 homolog | 358 | 2e-033 |
| Q7GBC8 Ubiquitin-related modifier 1 homolog | 356 | 3e-033 |
| Q0D6M1 Ubiquitin-related modifier 1 homolog | 356 | 3e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RDI8 Protein C9orf74, putative | 445 | 2e-042 |
| C6SXU4 Putative uncharacterized protein | 433 | 4e-041 |
| A5AJG5 Putative uncharacterized protein | 393 | 2e-036 |
| B9IC87 Predicted protein (Fragment) | 362 | 8e-033 |
| B8B5X5 Putative uncharacterized protein | 356 | 4e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G45695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin related modifier 1 (InterPro:IPR015221), Ubiquitin-related modifier 1 (InterPro:IPR017188), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61113.1); Has 238 Blast hits to 238 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 72; Plants - 18; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | 480 | 1e-048 |
| AT3G61113.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin related modifier 1 (InterPro:IPR015221), Ubiquitin-related modifier 1 (InterPro:IPR017188), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45695.1); Has 242 Blast hits to 242 proteins in 127 species: Archae - 2; Bacteria - 0; Metazoa - 93; Fungi - 74; Plants - 18; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | 450 | 3e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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