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Information for unigene UN12085

FASTA Sequence
Unigene ID: UN12085Length: 1023 SSR 
CGCATTGAGCTATCTGTCGATTACAAGTTATCATCCTAGAAGACGAACACGATTGTGAAAAAACTTCATCGTGAATTTCCTCTGAG
ATGGAATCGAACTCGGGAAGAGGAAACGAAGCGGAAGTCAATCACAATAATGCTGGTCAGCAGCACCAGCCAATGATGTACGCAGA
GCCTTGGTGGAAGAACAACTCTTTTGGTGTCGAGAGACCTTCTCTAGTTCCATCAAAGTCCTCCTCTTTGGAAGAGTGTCCGTACG
GTTCAGAGTCAAACGATGTTCATTCTGCAGCATCTGAAGACGATGGCGCTTGCAAGGATTCACAAGCTCCAACTTCCTCCCCTTCA
GTAGATAACCATGGAACAGAAGGGAATGATTCACAACTGGCGGCTCCTGTAGGTAACATGTATTGTCAGCAGCAACTTGTACAACC
ACCAGAGCTTGTTGGACACTACATTGCTTGTGTCCCAAATCCATATCAGGATCCATATTATGAGGGAATGGGTGGGATCATATGGA
CATCAGCAATTGGGTTTTCATCCATATCCTGGAATGCCTGGTGAAAGAACAGCACTACCGCTTGACACGACACAAGAACCTGCCTA
TGTGAATGCGAAACAGTACAAGGGAATTTTAAGGCGACGAAAAGCACGTGCCAAGGCCGAGCTAGAAAGGAAAGCAACCAACGGAA
ATCCATATTTTCATGAGTCAAGGCACAATCATGCAATGAGAAGGGCAAGGGTTAGTGGGGGCCGGTTTGCCAAGAAAACAGAGGCT
GAAGTAGCAGCTGAGAGAGAAAGAGAAAGGGGTTTTTCAGCAACCAACTCCTCAGGCGCTGAACCAGTTGAAACAGACTTTAATGA
GACCCTGAATTCTTAAGATGCACCATAATCAATCAAAGCGACACGCTTTGGCTAAAACTGGCAAATTATTCTTGGCTTTTTTTTTT
TCGGTTTTGTGTTTGCTTGCTTGTTCTTGTCAGAGTTTCATAGTGTGTGTGTGTGGGTTCTGGAGTCACAAATGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568282 nuclear transcription factor Y subunit A-1 [Arabidopsis thaliana]4716e-045
NP_850811 nuclear transcription factor Y subunit A-1 [Arabidopsis thaliana]4716e-045
XP_002873581 predicted protein [Arabidopsis lyrata subsp. lyrata]4619e-044
NP_566670 nuclear transcription factor Y subunit A-9 [Arabidopsis thaliana]3141e-026
BAB01900 CCAAT-binding transcription factor B subunit [Arabidopsis thaliana]3141e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q9LXV5 Nuclear transcription factor Y subunit A-14713e-046
Q945M9 Nuclear transcription factor Y subunit A-93153e-028
Q8VY64 Nuclear transcription factor Y subunit A-42132e-016
Q84JP1 Nuclear transcription factor Y subunit A-71972e-014
Q93ZH2 Nuclear transcription factor Y subunit A-31918e-014

TrEMBL top hits (Blast detail)Scoree value
B9DGV8 AT5G12840 protein4714e-045
Q1ECD3 At5g128404714e-045
C6TD07 Putative uncharacterized protein3031e-025
B9GF01 Predicted protein2861e-023
A5BU97 Putative uncharacterized protein2762e-022

Arabidopsis top hits (Blast detail)Scoree value
AT5G12840.1 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor4722e-047
AT5G12840.2 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor4722e-047
AT5G12840.4 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor4722e-047
AT5G12840.3 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor4722e-047
AT3G20910.1 NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor3153e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

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