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Information for unigene UN12086
| FASTA Sequence |
| Unigene ID: UN12086 | Length: 963 |
| SNP | GACAGTGTGATTGTGTGGAGGAGATTGACGATGGAGAATAACAAAAGATGGTCCCTCGCCGGAAAAACCGCTCTGGTAACCGGTGG
TACTCGCGGAATTGGGCGAGCGGTAGTGGAGGAGCTAGCGAGATTCGGTGCAACAGTTCATACATGTTCAAGGAACCAGGAGGAGC
TCAAATCATGCTTGGATGATTGGAAGTCCAATGGTTTAGCGGTAACCGGTTCGGTCTGCGATGCTTCGGATAGGGATCAGAGGGAG
AAGTTGATTCAGGAAGTTTCGTCTGCCTTTAGCGGCAAGCTCAACATCCTTATAAACAATGTTGGAACTAATATAAGGAAACCAAC
AGTGGAGTACACGAGTGAGGATTATGCTAAAATCATGTCGATCAACTTGGAATCCGCTTTCCATTTTTCCCAAATTGCACATCCTC
TTTTAAAAGCATCTGGGGTTGGTAGCATTGTGTTCATCTCCTCTGTGGCTGGACTGGTTCATCTTAGTAGTGGATCTGTCTATGGT
GCAACTAAAGGAGCACTTAATCAGCTTACAAGGAACCTAGCTTGCGAATGGGCAGGGGACAACATCAGAACCAATTGCGTGGCGCC
GTGGTACATCAAGACCTCACTTGTGAAACCGCTACTTGAGAAGAAAGGTTTTGAGGAGGCGGTGGTTTCGCGTACCCCACTTGGGC
GCGTTGGAGAACCAGAGGAAGTCTCGTCGCTGGTTGCTTTCCTCTGCCTTCCCGCAGCTTCTTACATCACCGGTCAGGTCATTTCT
GTTGACGGAGGATTCACAGTCAACGGCTTCAGTTACACCATATAGTCAAAATCTCTCATCGCAACTTTTACTAATAATAAAACAAG
AACTCGTTCGTGTGGTTTCTTCCCATTCGTCTTGTTTGCCTCTGTTATTAAGAATACTAGGATGTGGACCTCCGCGGAAAGTTAAT
ATCAAGTTTTCAATATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196225 tropine dehydrogenase [Arabidopsis thaliana] | 1217 | 2e-131 |
| XP_002873234 hypothetical protein ARALYDRAFT_487407 [Arabidopsis lyrata subsp. lyrata] | 1214 | 4e-131 |
| AAM61117 short chain alcohol dehydrogenase-like [Arabidopsis thaliana] | 1208 | 2e-130 |
| XP_002311182 predicted protein [Populus trichocarpa] | 1013 | 8e-108 |
| XP_002524214 tropinone reductase, putative [Ricinus communis] | 997 | 6e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ASX2 Tropinone reductase homolog At1g07440 | 884 | 3e-094 |
| P50165 Tropinone reductase homolog | 788 | 4e-083 |
| P50162 Tropinone reductase 1 | 768 | 9e-081 |
| P50164 Tropinone reductase 2 | 735 | 6e-077 |
| P50163 Tropinone reductase 2 | 721 | 3e-075 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LHT0 Putative short chain alcohol dehydrogenase | 1217 | 1e-131 |
| Q8LFZ4 Short chain alcohol dehydrogenase-like | 1208 | 1e-130 |
| B9HML1 Predicted protein | 1013 | 5e-108 |
| B9SDZ5 Tropinone reductase, putative | 997 | 4e-106 |
| C5WQ28 Putative uncharacterized protein Sb01g039880 | 955 | 3e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G06060.1 tropinone reductase, putative / tropine dehydrogenase, putative | 1217 | 7e-134 |
| AT2G29350.1 SAG13; alcohol dehydrogenase/ oxidoreductase | 895 | 2e-096 |
| AT2G29360.1 tropinone reductase, putative / tropine dehydrogenase, putative | 894 | 2e-096 |
| AT2G29260.1 tropinone reductase, putative / tropine dehydrogenase, putative | 893 | 3e-096 |
| AT2G29290.1 tropinone reductase, putative / tropine dehydrogenase, putative | 891 | 4e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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