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Information for unigene UN12119
| FASTA Sequence |
| Unigene ID: UN12119 | Length: 784 |
| SNP | GGATTACAGAACAGCAGAGAAAACGAAACAGTTGTTTATTTTTCCCGACAGATTGATTCCACTTTCCCAAATCTTCTACCAAACAC
ACATATTCTCCTCTCTCGGCGGCACTCAGGTATGAGTAGCCCCATCGCTTTGTCACCGGCCTTCTCCGCCGCCGTTCTCCCTCCGT
CCTCACACGGGCTCAAATCTTGCATCGTCTCGCCTCTCGCCTCTCAATCTCGAATCAAACGAACCAGCTCGAGAAGAGCTTCCACG
ATGACGGTTCGATGCGACGTAGCTGTGTCAGTGAACGCAGAGGAGGCCGAGCTTTCGGAAGAAGAGATCGAAGCGAAAGGAAAGGT
GGGATCTTTGGTCAGAGTGACTGCGCCGCTGAAGGTTTACCACGTGAACCGCGTCCCGGAGATTGATTTGGAAGGGATGGAAGGTA
AGCTCAAGGACTACGTCGCCGTGTGGAAAGGGAAAAGAATATCAGCTAATCTTCCTTACAGGGTCGAGTTCTTCAAAGAGGTTGAA
GGTCGTGGTCCTGTTAAGTTCGTCGCTCATCTCAAGGAAGACGAGTTCGAGTTCATCGAACCATGATGATGAAAAACAACAAAAGG
CAACATTGTTTCTTTCTCTCACTCTCTGTTGTTCTTTTGTTTTACTGAAAAACTTGGGAGTGGAGAATGATTTGTATGTACTGAGA
ATATACTGATGTATGTGTATGTATACCTTTAGCAATCATATACATAATCAGCTCTTCACCTCTCCCATTTGTTATCATTGATTCAT
CTATTCCCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89629 lipoic acid synthase-like protein [Brassica rapa] | 604 | 1e-060 |
| NP_197735 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 [Arabidopsis thaliana] | 421 | 2e-039 |
| XP_002874131 FTRA1 [Arabidopsis lyrata subsp. lyrata] | 416 | 9e-039 |
| NP_568195 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 [Arabidopsis thaliana] | 375 | 5e-034 |
| CAC08341 lipoic acid synthase-like protein [Arabidopsis thaliana] | 375 | 5e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P80680 Ferredoxin-thioredoxin reductase, variable chain | 285 | 7e-025 |
| P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic | 229 | 2e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXL0 Lipoic acid synthase-like protein | 604 | 1e-060 |
| Q9FHL4 At5g23440 | 421 | 2e-039 |
| Q8LBP6 At5g08410 | 375 | 4e-034 |
| Q9FT94 Lipoic acid synthase-like protein | 375 | 4e-034 |
| A5B8T4 Putative uncharacterized protein | 349 | 4e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23440.1 FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1); catalytic/ ferredoxin reductase/ ferredoxin:thioredoxin reductase/ lipoate synthase | 421 | 1e-041 |
| AT5G08410.1 FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2); catalytic/ ferredoxin reductase/ ferredoxin:thioredoxin reductase/ lipoate synthase | 376 | 2e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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