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Information for unigene UN12129
| FASTA Sequence |
| Unigene ID: UN12129 | Length: 1222 |
SSR | | GATATTCCTGTTGTTGATCTCTCTAAACTGTCTAAACCTCACACTCATGATGATTTTCTCTTTGAGATTCTTAAGCTGTCACAAGC
TTGTGAAGACTGGGGATTTTTCCAGGTTATAAATCATGGGATTGAAGGGGGTGTGGTGGAAGGTATAGAGAAGGTGGCCAAGGAGT
TCTTCGAGATGCCACTGGTGGAGAAGAAGAAGTATCCAATGGAGCCAGGGACCGTACAAGGTTACGGTCAAGCTTTCATCTTCTCT
GAAGATCAGAAGCTTGATTGGTGCAACATGTTTGCTCTTGGTGTTCATCCTCCTTCTATTCGCAACCCCAAACTATGGCCTTCTAA
ACCGGCCCGGTTCAGTGAAAATCTTGAAGGTTACTCAAAAGAGATAAGGAAATTATGCAAGAGGTTGTTGAAGTACATAGCAATAA
GCTTGGATCTAAAGGAAGAGAAATTTGAAGAAATGTTTGGGGAAGCAGTGCAAGCCGTAAGGATGAACTATTACCCACCATGTTCA
CGTCCTGATCTTGTCTTGGGACTCAGCCCACATTCTGATGGTAGTGCTCTCACTGTTCTTCAACAGAGTAAGAACAGCTGTGTTGG
GCTTCAGATCCTCAAGGACAACACTTGGGTCCCTGTACTACCTCTTCCCAATGCCCTTGTCATCAACATTGGTGATACAATTGAGG
TGTTAACTAATGGGAAGTACAAGAGTGTAGAGCATAGAGCAGTGACAAACAGAGAAAGGGAGAGGCTTACCATAGTGACATTCTAT
GCACCAAACTACGAGGTTAAAATAGAGCCAATGGGTGAGTTGGTTGATGATGAAACCAACCCATGCAAGTATAGAAGCTACAATCA
TGGTGACTATAGTTATCACTATGTCTCCAACAAGCTCCAAGGCAAGAAGTCACTTGATTTTGCCAAGATTCTCAATTAACTATATT
ATTTTCACACCCCTTTCCCCTTCCATTAACTAGTTACCACTTAATTTGTTTTAATTTTAAGAATTTAGTTGTGGGACTCTTGTGAG
TATAATGTACAGGAATGTTTCCCACTTAGGGGGTTTAGTGTCATGATTAAATCCCCCAATGTAACTACAACTTGTAATATATTATG
TGTGTGTGTGTATGGTGGAGTTGGGTGTGTTTATGTGTTCATATGTATGCCGAGAAGGAACATAAAGAATAAGAAAGAACAAGATC
AGATCCATGTTTATGTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883305 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1536 | 3e-168 |
| NP_566685 oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] | 1522 | 1e-166 |
| XP_002272119 PREDICTED: hypothetical protein [Vitis vinifera] | 1215 | 4e-131 |
| XP_002516897 Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] | 1213 | 7e-131 |
| XP_002315563 predicted protein [Populus trichocarpa] | 1195 | 9e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39224 Protein SRG1 | 716 | 1e-074 |
| A2A1A0 S-norcoclaurine synthase 1 | 602 | 2e-061 |
| Q9ZWQ9 Flavonol synthase/flavanone 3-hydroxylase | 531 | 4e-053 |
| Q7XZQ8 Flavone synthase | 427 | 4e-041 |
| P31528 Probable 1-aminocyclopropane-1-carboxylate oxidase | 418 | 5e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIF4 At3g21420 | 1522 | 7e-167 |
| B9RT28 Flavonol synthase/flavanone 3-hydroxylase, putative | 1213 | 5e-131 |
| B9HSC7 Predicted protein | 1195 | 6e-129 |
| B6U6C1 Flavonol synthase/flavanone 3-hydroxylase | 1025 | 3e-109 |
| C5XH53 Putative uncharacterized protein Sb03g045170 | 1024 | 4e-109 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21420.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1523 | 3e-169 |
| AT1G17020.1 SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | 716 | 1e-075 |
| AT4G25310.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 695 | 3e-073 |
| AT1G78550.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 694 | 4e-073 |
| AT4G25300.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 677 | 4e-071 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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