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Information for unigene UN12179

FASTA Sequence
Unigene ID: UN12179Length: 1155  SNP
GGGATCTCCCAAAATTCGCTTCTCTATTCGTTTGCCCCCACCAAATAAATTTTAGATTCTATTAATTTTAATTTGATTTTAATTTG
TTTTTTTAGTTTTAGTTTCAGAACTTGAATATATACATCCTTCCTCATCATCGTATTGGAATAGAAAAAAAACCCTAATAAGAACG
AAGCGACAGAAAAAGAAAGAAACAAATCTTTGGGAGCCTCCTCCTCTCTCTTTTGTTCTGGTGTTCCTCATCGAGTTAGAGCTAAG
AGTGATTTTATTCGTTTTCCTCTTCAGCTACGAGGAGAGAAGAAGGTCTTATGAGACGTTCAATCTCTCACTAAAGAAAACGTTGC
TGGTCTTTTTATTATTAGGCAGAGCAGATGGATGAAAACAATGCTGCAAAGTTAGGCGGAATCAGGCAGATCGTGAGACTAAAGGA
GATTTTGCAGAAATGGCAAACTGCAACCATTGGCCCCAAGTCAGATATCGCTCCATTAGCAGCTGGAAAGCAAGCGGCGGCAATGA
TCTCACCGGTTATCAACAAGAGGCTATTTGCCGTCAAGAATTGTGACTCGGATGAGGAGAACTGCCAAAGCCCCGAGCCTCCCGTT
GATGTTCCCAAAGGGTATCTAGCGGTTTATGTTGGACCGGAGCTAAGGAGGTTTATCATACCAACAACTTATCTTAGCCACTCTTT
GTTCAAGGTGTTGCTCGAGAAGGCAGAGGAAGAGTTTGGGTTTGATCAGAGTGGTGCACTCACCATCCCTTGCGAGGTCGAGACTT
TCAAGTTTTTAATCAAATGCATGGAGAACAATCCTAAAGATTATCACCCTGAAGACACTCCCGCTGGGGATGATGCAGTAGCAGCA
AATGAGGACTAAATACAAATCAAGTGATGAACAACTCTTAAAAACTCTTCTTTTGTTATTATGGTTATTGTTATCCTTTATTATCA
TTTTAATCATATGGAATTGTTAGGGATCATTACTCTGGGGTGTAATTGTAAAATCAGATTATCTTTGTATTTTCCTGGTTCTTATT
TTCTTCTCCATTATTTTTGAAGGAGGGATTTAAGTTTTCTTTTTAGATATACATGTTAGATGTGAACAGATTTGGTGGACGAAATG
TGATACGAGATTAAACATGAACACAACCTCTTGTACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871957 hypothetical protein ARALYDRAFT_488986 [Arabidopsis lyrata subsp. lyrata]7333e-075
NP_197581 SAUR-like auxin-responsive protein [Arabidopsis thaliana]7101e-072
NP_001031914 SAUR-like auxin-responsive protein [Arabidopsis thaliana]6966e-071
NP_189898 SAUR-like auxin-responsive protein [Arabidopsis thaliana]6133e-061
ABK28585 unknown [Arabidopsis thaliana]6133e-061

Swiss-Prot top hits (Blast detail)Scoree value
P33081 Auxin-induced protein 15A1935e-014
P32295 Indole-3-acetic acid-induced protein ARG71927e-014
P33082 Auxin-induced protein X151919e-014
P33079 Auxin-induced protein 10A51882e-013
P33080 Auxin-induced protein X10A1855e-013

TrEMBL top hits (Blast detail)Scoree value
Q8GWV6 At5g208107101e-072
Q2V359 Uncharacterized protein At5g20810.26964e-071
A0MF00 Putative uncharacterized protein (Fragment)6132e-061
Q9M249 Auxin-responsive protein-like protein6132e-061
Q8LE18 Putative uncharacterized protein6006e-060

Arabidopsis top hits (Blast detail)Scoree value
AT5G20810.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_B)7123e-075
AT5G20810.2 auxin-responsive protein, putative / small auxin up RNA (SAUR_B)6962e-073
AT3G43120.1 auxin-responsive protein-related6131e-063
AT4G31320.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_C)2365e-020
AT2G24400.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_D)2213e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  43%
 
112  29%
 
71  14%
 
81  14%

Unigene MembersMember information