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Information for unigene UN12179
| FASTA Sequence |
| Unigene ID: UN12179 | Length: 1155 |
| SNP | GGGATCTCCCAAAATTCGCTTCTCTATTCGTTTGCCCCCACCAAATAAATTTTAGATTCTATTAATTTTAATTTGATTTTAATTTG
TTTTTTTAGTTTTAGTTTCAGAACTTGAATATATACATCCTTCCTCATCATCGTATTGGAATAGAAAAAAAACCCTAATAAGAACG
AAGCGACAGAAAAAGAAAGAAACAAATCTTTGGGAGCCTCCTCCTCTCTCTTTTGTTCTGGTGTTCCTCATCGAGTTAGAGCTAAG
AGTGATTTTATTCGTTTTCCTCTTCAGCTACGAGGAGAGAAGAAGGTCTTATGAGACGTTCAATCTCTCACTAAAGAAAACGTTGC
TGGTCTTTTTATTATTAGGCAGAGCAGATGGATGAAAACAATGCTGCAAAGTTAGGCGGAATCAGGCAGATCGTGAGACTAAAGGA
GATTTTGCAGAAATGGCAAACTGCAACCATTGGCCCCAAGTCAGATATCGCTCCATTAGCAGCTGGAAAGCAAGCGGCGGCAATGA
TCTCACCGGTTATCAACAAGAGGCTATTTGCCGTCAAGAATTGTGACTCGGATGAGGAGAACTGCCAAAGCCCCGAGCCTCCCGTT
GATGTTCCCAAAGGGTATCTAGCGGTTTATGTTGGACCGGAGCTAAGGAGGTTTATCATACCAACAACTTATCTTAGCCACTCTTT
GTTCAAGGTGTTGCTCGAGAAGGCAGAGGAAGAGTTTGGGTTTGATCAGAGTGGTGCACTCACCATCCCTTGCGAGGTCGAGACTT
TCAAGTTTTTAATCAAATGCATGGAGAACAATCCTAAAGATTATCACCCTGAAGACACTCCCGCTGGGGATGATGCAGTAGCAGCA
AATGAGGACTAAATACAAATCAAGTGATGAACAACTCTTAAAAACTCTTCTTTTGTTATTATGGTTATTGTTATCCTTTATTATCA
TTTTAATCATATGGAATTGTTAGGGATCATTACTCTGGGGTGTAATTGTAAAATCAGATTATCTTTGTATTTTCCTGGTTCTTATT
TTCTTCTCCATTATTTTTGAAGGAGGGATTTAAGTTTTCTTTTTAGATATACATGTTAGATGTGAACAGATTTGGTGGACGAAATG
TGATACGAGATTAAACATGAACACAACCTCTTGTACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871957 hypothetical protein ARALYDRAFT_488986 [Arabidopsis lyrata subsp. lyrata] | 733 | 3e-075 |
| NP_197581 SAUR-like auxin-responsive protein [Arabidopsis thaliana] | 710 | 1e-072 |
| NP_001031914 SAUR-like auxin-responsive protein [Arabidopsis thaliana] | 696 | 6e-071 |
| NP_189898 SAUR-like auxin-responsive protein [Arabidopsis thaliana] | 613 | 3e-061 |
| ABK28585 unknown [Arabidopsis thaliana] | 613 | 3e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P33081 Auxin-induced protein 15A | 193 | 5e-014 |
| P32295 Indole-3-acetic acid-induced protein ARG7 | 192 | 7e-014 |
| P33082 Auxin-induced protein X15 | 191 | 9e-014 |
| P33079 Auxin-induced protein 10A5 | 188 | 2e-013 |
| P33080 Auxin-induced protein X10A | 185 | 5e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWV6 At5g20810 | 710 | 1e-072 |
| Q2V359 Uncharacterized protein At5g20810.2 | 696 | 4e-071 |
| A0MF00 Putative uncharacterized protein (Fragment) | 613 | 2e-061 |
| Q9M249 Auxin-responsive protein-like protein | 613 | 2e-061 |
| Q8LE18 Putative uncharacterized protein | 600 | 6e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20810.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_B) | 712 | 3e-075 |
| AT5G20810.2 auxin-responsive protein, putative / small auxin up RNA (SAUR_B) | 696 | 2e-073 |
| AT3G43120.1 auxin-responsive protein-related | 613 | 1e-063 |
| AT4G31320.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_C) | 236 | 5e-020 |
| AT2G24400.1 auxin-responsive protein, putative / small auxin up RNA (SAUR_D) | 221 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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