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Information for unigene UN12180

FASTA Sequence
Unigene ID: UN12180Length: 816 SSR 
GGAGAGAAGCTGGAAAGAAGGTTCTAGGGGGAAGAAGAAGAGTTTGTTCGGTGCTCTCTCTCTCTCAATAAACTTGGCTTCATCTT
CTCTGCTTCTGAATCGATCCGATCTTGACGAACATGTCTTCTCCTGGCGAATACTACAACTCACTTCCTCCAATAACCAAGGCTTA
TGGTACTTTGTGCCTCCTGGCTACAACCCTAGCCCAGCTTGGCTTAGTTGCTCCTATTCACATTGCTTTGATTCCTGAACTTGTCT
TTAAGAACTTCCAGGTTTGGAGGCTGATAACGAACTTGTTTTTCCTTGGTGGCTTCTCTATCAATTTCGGGATACGTCTTTTGATG
ATAGCAAGGTATGGAGTTCTACTCGAGAAAGGGCCATTTGAAAGGCGGACAGCAGACTTTTTGTGGATGATGATCTTTGGATCCCT
GACTCTCTTGGTTTTATCAACCATACCATTTTTCTGGACACCATTCCTTGGAGTTTCACTTGTGTTCATGCTTCTGTATCTCTGGA
GCCGAGAGTTTCCAAATGCCAACATCAGCCTCTACGGTCTTGTCAATCTTAAGGCTTTCTACCTCCCATGGGCAATGCTAGCACTC
GACGTTATCTTCGGTTCCAAGATCATGCCAGATCTTCTTGGCATCATAGCTGGACATCTGTACTACTTCCTAACAGTCCTTCACCC
TCTCGCCACCGGAAAGAACTACCTGAAAACCCCGAAATGGGTTAATAAACTGGTAGCAAGATTTCGAATTGGAGCCCCAGTGGCGG
CTGTTCGTCAAGCAGTGGTGTAGAGCATAGATCCGGACTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194662 derlin-1 [Arabidopsis thaliana]10791e-115
XP_002869440 hypothetical protein ARALYDRAFT_491823 [Arabidopsis lyrata subsp. lyrata]10692e-114
CAB79691 putative protein [Arabidopsis thaliana]10503e-112
XP_002275238 PREDICTED: hypothetical protein [Vitis vinifera]9562e-101
XP_002309232 predicted protein [Populus trichocarpa]9123e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZU9 Derlin-110796e-117
Q06397 Derlin-18422e-089
Q4G2J6 Derlin-1.18125e-086
Q4G2J5 Derlin-1.28028e-085
Q8BNI4 Derlin-24263e-041

TrEMBL top hits (Blast detail)Scoree value
B9H8Y1 Predicted protein9122e-096
B9RKF3 Derlin-3, putative8924e-094
B7FA80 Putative uncharacterized protein8423e-088
B8AYW3 Putative uncharacterized protein8423e-088
B6U3C7 Derlin-38145e-085

Arabidopsis top hits (Blast detail)Scoree value
AT4G29330.1 DER1 (DERLIN-1)10796e-118
AT4G04860.1 DER2.2 (DERLIN-2.2)2184e-018
AT4G21810.1 DER2.1 (DERLIN-2.1)2141e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
121  33%
 
111  33%

Unigene MembersMember information