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Information for unigene UN12197

FASTA Sequence
Unigene ID: UN12197Length: 815 SSR 
GTTACGGCCGGGGGACAAACAAATTTATTTCATTCATTAGCTAAGTTTAGTTTCTGAAACAAAACATCTAACCAAAAAGAGTTATG
ACTGGAAGCCACTTATATTGTCTTATAACCATGGAGAAGAGTTCCTTGTCCAAATGCAAACACTCTTCTTCTTCTTCTTGTTTCAC
TTTGTTTGGTCTGATCGATTTTTTCCTCATCAATTTTTTCCAATGGGTTTCTCTCGCTCAGATCTTTTTCTCCAGATCTTGTCCTC
TTCTTCTTCAACACCAGCAATGTGTTTCCGAGAAGAAGAGCAAAGATCTCGATGTCCAGAGCTCCATCAAACATGATGATGGTCTT
TGCGGAGAAGATGCGGAGATGGTGATGAGAAGCTTAGGACTTCTCACGGCCGACTCAAAAAGCGAGGGCCTTCAGAAACGTTACAG
TTCGGAGGAGCTTTCGAACCTGTTTGAAGAGAAGGAGCCGAGCTTGGAGGAAGTGAAGCAGGCTTTTGATGTCTTTGATGAAAACA
GAGATGGGTTTCTTGATCCAGTAGATTTGCAAGGATCTAACCTTGAGAACTGCAGGAGAATGATCAGATCGTTTGATGGAAACAAA
GATGGAAGAATCGATTTCTATGGATTTGTGAAATTCATGGAGAACAACTTCTGCTGAAAATCATAGTTTATGAAGTAATAATCTAT
CATCTTCTGCACTCTTTTTATTTTATTTTAACTTCTTTGCTTTAAGATAACGTCTCTTAATATGGTTTTCTAATCACCTTCTTGTA
AAAATTATTGAAGTTTAATATCAAAAGCTCATATAGAGCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870769 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata]5745e-057
NP_568568 putative calcium-binding protein CML45 [Arabidopsis thaliana]5541e-054
BAB08899 unnamed protein product [Arabidopsis thaliana]5333e-052
XP_002875484 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata]3442e-030
NP_189542 putative calcium-binding protein CML30 [Arabidopsis thaliana]2286e-017

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z27 Probable calcium-binding protein CML455545e-056
Q9MBG5 Probable calcium-binding protein CML302283e-018

TrEMBL top hits (Blast detail)Scoree value
A5AJU7 Putative uncharacterized protein2662e-021
C6TB68 Putative uncharacterized protein2195e-016
B9IJZ4 Predicted protein2089e-015
C6T2L2 Putative uncharacterized protein1935e-013
B9S8Y4 Calcium ion binding protein, putative1918e-013

Arabidopsis top hits (Blast detail)Scoree value
AT5G39670.1 calcium-binding EF hand family protein7302e-077
AT3G29000.1 calcium-binding EF hand family protein2283e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  100%

Unigene MembersMember information