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Information for unigene UN12251

FASTA Sequence
Unigene ID: UN12251Length: 975 SSR 
GGAGAAAGTGTCTCTGTGTAATAATAAACCACTTTCCTTTTGCCTCCTCCCTTCGACTTTCCTCTTCCGAATTTCACTTTCCTCTT
CTCACGAAAATCTCACGATCGCTCGAGATGGATCTACAACCATCTTCCTCTGCTTCTTGATCTCTTACTTAGGTCTGTTATCTTCC
CAGGTAAAGCTGTTATCATCTCTTGTAGTGTATATTGTCTTTATCTGATCATGTCTCCACTGCTGGAGACTCTTGACATGGATGCT
GCTGGCAATGGTAACTCTCTGGAAGCTCATGCTTTTTTGCAACTGCTTGCCACTTTTGGTGTTGTTTCCGATTTTGAAGAGGATGA
GATCTTGAAGCTGATTCCTATGGTCTCGCGTCGCCGCCAGGCGGCTGAGCTTTGCCGTTCTCTTGGATTGTCTGGAAAAATGCCTG
GTGTGATTGAAGTTCTAGTGAACAGTGGTAAACAGATTGATGCTGTGAACTTGGCATTTGCGTTTGGACTCACAGAACAGTTCCCA
CCTGTTGAGTTGCTTAAATGTTACTTGACTGAGGCAAGTAGATCTACCTCCCAAGGCGTACCTGGCGATGCATCTCCTGCTGTTCA
GGATGAGTTCAGTGAGAGGGAGCTGACGAGTCTTAAGGCTGTGATAAAGTGTGTGGAAGAGCATAACCTGGAAGAGCAGTACCCAG
TTGAGCCACTTCACAAAAGGATTCTCCAGCTGGAGAAGGCCAAAGCTGAGAAAAAGAGAGCAACGGAGCCCACGAAGCCTCAGACA
AAGCGACCACGTGGTCCTCAACCCCGAGCCACTGACAACAACAACAACAATAACAGTAAGACAGGATATGGTAGAGTGATACCTGA
GAGGTATCCGCAGTATGTGTATGACAACATATCGTTCCTTAGCGGTCCAATCATGGCAGCACAACCTCCTCCTCCTCAGACTTACA
CTTTCAGTCCAGCTGCTGCTGCTCATGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850923 FRIGIDA-like protein [Arabidopsis thaliana]10513e-112
AAM96992 putative protein [Arabidopsis thaliana]10479e-112
ABK94872 unknown [Populus trichocarpa]7574e-078
XP_002303026 predicted protein [Populus trichocarpa]7574e-078
XP_002320559 predicted protein [Populus trichocarpa]7565e-078

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67ZB3 Putative uncharacterized protein At5g4839010512e-112
Q8L7D6 Putative uncharacterized protein At5g4839010476e-112
A9PER9 Putative uncharacterized protein7573e-078
B9GNI0 Predicted protein7573e-078
B9IB06 Predicted protein7564e-078

Arabidopsis top hits (Blast detail)Scoree value
AT5G48385.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 987 Blast hits to 921 proteins in 78 species: Archae - 0; Bacteria - 16; Metazoa - 58; Fungi - 7; Plants - 873; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).10537e-115
AT3G22440.1 hydroxyproline-rich glycoprotein family protein3342e-031
AT4G14900.1 hydroxyproline-rich glycoprotein family protein3126e-029
AT1G31814.1 FRL2 (FRIGIDA LIKE 2)2661e-023
AT5G27220.1 protein transport protein-related1764e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
91  50%

Unigene MembersMember information