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Information for unigene UN12259
| FASTA Sequence |
| Unigene ID: UN12259 | Length: 765 |
SSR | | CGGGGGGAAAAGAAAAGAGGAAAACCCTAGCTTTCTCCGTCTCTCTCTCTCTCTCTAACCTTGAGAAAGTCTCGAGACTTTTTGAG
AGTCGAACCTCGAAATATGTACAAGGAACGCAGTGGTGGATCGTCGAGATCGGAGATCCTCGGCGGAGCAGTTGACCGGAAACGAA
TCAACGACGCACTCACCAAGAAGCTAGAGAAATCTTCACCTTCCACCTCTAGAGCTTTCGCTTCCACTGCTGCTAAACCTCAGCTT
CCTGATGTGGAGTCTGAAACGGACAGTGAAGAAGGTTCGGATGTGAGTGGATCGGAGGGTGATGAAGAGACATCGTGGATCTCGTG
GTTTTGCAACTTGAGAGGGAATGATTTCTTCTGCGAAGTGGATGAGGATTATATACAAGATGATTTCAATCTTTGTGGGTTAAGTG
GTCAAGTTCCTTACTATGACTATGCACTTGATCTCATCCTAGATGTTGAGTCTTCAAACAGCGAGATGTTTACCGAAGAACAGAAT
GAACTTGTGGAATCAGCTGCTGAGATGCTGTATGGTCTTATTCATGTCCGTTACATTTTGACTACTAAAGGAATGGCTGCAATGAC
TGAGAAGTACAAGAACTGTGACTTCGGGAGGTGTCCGGGAGTGTTCTGTTGCGGACAGTCTTGTCTTCCTGTTGGACAGTCTGATA
TCCCGAGATCGAGTACTGTGAAGATATACTGCCCAAATGCGAGATATTCTTACCGCGATCTAGTCCAAGCATATTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191584 casein kinase 2 subunit beta-3 [Arabidopsis thaliana] | 952 | 6e-101 |
| NP_001118861 casein kinase 2 subunit beta-3 [Arabidopsis thaliana] | 952 | 6e-101 |
| XP_002878325 hypothetical protein ARALYDRAFT_486495 [Arabidopsis lyrata subsp. lyrata] | 822 | 7e-086 |
| XP_002881976 hypothetical protein ARALYDRAFT_483599 [Arabidopsis lyrata subsp. lyrata] | 786 | 1e-081 |
| NP_181996 casein kinase 2, beta polypeptide [Arabidopsis thaliana] | 778 | 9e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81275 Casein kinase II subunit beta-3 | 952 | 3e-102 |
| O80507 Putative casein kinase II subunit beta-4 | 778 | 4e-082 |
| P40228 Casein kinase II subunit beta | 707 | 7e-074 |
| P40229 Casein kinase II subunit beta' | 691 | 5e-072 |
| P67868 Casein kinase II subunit beta | 466 | 7e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H4P8 Uncharacterized protein At3g60250.2 | 952 | 4e-101 |
| Q24JI1 At3g60250 | 952 | 4e-101 |
| C6TLN9 Putative uncharacterized protein | 787 | 6e-082 |
| B9RUR0 Casein kinase II beta chain, putative | 738 | 3e-076 |
| Q8LPD2 Protein kinase Ck2 regulatory subunit 2 | 734 | 8e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G60250.1 CKB3; protein kinase regulator/ transcription factor binding | 952 | 3e-103 |
| AT3G60250.2 CKB3; protein kinase regulator/ transcription factor binding | 952 | 3e-103 |
| AT2G44680.1 CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase | 916 | 4e-099 |
| AT2G44680.2 CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase | 916 | 4e-099 |
| AT5G47080.1 CKB1; protein kinase regulator | 707 | 7e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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