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Information for unigene UN12273

FASTA Sequence
Unigene ID: UN12273Length: 1094 SSR 
ACCCCGAGGAGATTTGCACTTCTCTCATGAGTGTAAACATGTCTGGTAACAGTTTCCAGAGACTTCCAGACACGTGGACTTCTATT
CAACCTAAAGATCTTGACATCAGTAATTGCCGAAATCTTGCGTCTCTCCCAAATCTCCCTGCATCACTCTGCAATCTAACGGCGAA
TCACTGCGAATCACTTGAGACTCTATATGGCCCCTTCCAACAGAGACAGATGGGTCTTCAATTTATTAACTGCTTCAAACTGAATA
ACAAAGCGAGAGCATTCATTCTACGTTCAGACTGTGCCTATGCTATCTTACCTGGTGAAGAACTTCCTTTATATTTCCCTCATCGA
GTTGATGGAAATCTTATAACCGTCCCTTTACCTAGGACCACTCTTTTCAGAAAAGTCTCGAGTTTTAAAGCTTGCATCATGGTTGA
ATCAAGAGTATGCTGGTTTGACTTTGGGGTGAATTTGGTTTTCCAGAGGTGCAGCGGGTACTAAATATTTCAGTTTGTCAACAAAC
ATATACTCTAAGAAGAATCATCTCATCATATTCGGTTTTGGGTTCTCTTCGGATGAATTCAGTGATCATTTGCAGTTTGACTTTTT
TTGCCGAGACAAAAAGAAGAAAACGATAAAGATAAAAGAATGTGGTGTACAGCTCTTGGTGGTTTCTCCATCTTTGAATGATAGTA
GGAAACGCTTTGAAACTGAGGACGACGACAAGTCTGGAGTGACCTACGCAGAGTCGAGTAGAAGCAGTAAGCAAATGCTTGTAACT
TAAAAGCATCTCAAGAACCTCCTGAGTTGTCCATATACCATGAAATGTCCTGAAGATGAGAACTCCGATAAATGCAATTCTACTGA
AGCTTCCTTTGAATTTACTGTGGGAGATAGTACAAATGAGAAGGGAAAATTCAAGGTGATGAATCTGTTCCAAGTTAAGCATTTGC
CTTCCAAGCAGCAACATTTTTTTGCTATTTCTTGTTCTAGTTAAATTAAAGAATCTTACTCACGATTCTCTCTCTCTCTCTATACT
GAGAAATCTGTAAAGGCTATCTTTCTTGCACGAGGATAATTCAACCCTTACTGTTTTCAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865257 predicted protein [Arabidopsis lyrata subsp. lyrata]4824e-046
NP_197336 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]2673e-021
NP_199337 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]2621e-020
ACP30568 disease resistance protein [Brassica rapa subsp. pekinensis]2476e-019
ABB00891 disease resistance protein [Arabidopsis thaliana]2451e-018

Swiss-Prot top hits (Blast detail)Scoree value
O82500 Putative disease resistance protein At4g111702105e-016

TrEMBL top hits (Blast detail)Scoree value
D1GEC6 Disease resistance protein2474e-019
Q38JY5 Disease resistance protein (Fragment)2458e-019
Q38JY3 Disease resistance protein (Fragment)2441e-018
Q38JX7 Disease resistance protein (Fragment)2394e-018
Q7FKS0 Putative disease resistance protein2394e-018

Arabidopsis top hits (Blast detail)Scoree value
AT5G18350.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor2671e-023
AT5G45240.1 transmembrane receptor2625e-023
AT1G63880.1 disease resistance protein (TIR-NBS-LRR class), putative2392e-020
AT5G38850.1 disease resistance protein (TIR-NBS-LRR class), putative2356e-020
AT1G63750.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding2312e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information