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Information for unigene UN12296
| FASTA Sequence |
| Unigene ID: UN12296 | Length: 1089 |
SSR | | GGGTATCAGCATGTCTCCTTCGTGATAGAGTCTTTCCTCTTATCTGTAAACCAATCCTTATAATCCTGGCCGTTAATTTCAGAATA
TAATCGCAATCTGTTGTCTCTGATGTTCCTGTCCTAATGTCATTTTCGATCAATTGGTCGGATTAGTGGAGTAACTCTCCTCCTCC
TCAGTCCTCGCCATGTCCTAATCTTGTGAAAGATCAGAGCTTTTTTTTCTCTCTCTCTCTCGCTTTTAGTTGACTTTTGAGATAAA
TGATGCTGGATCTCAACCTCGACGTCGCCGTGTCGGCTGAGTCTACTCAGATGGATGAATCGGTGACGTCGAACTCTTCGGTGGTC
AATGCGGAGGCGTCAAGCTGCATCGACGGTGAAGAGGAGCTCTGCTCCTCCACACGCGCCGTCAAGTTTCAGTTTGAAATATTGAA
AGGAGGAGAAGAAGAAGAAGAAGATGGAAGTGATGTGATGCAGAAGACTAAAGAGTTTTTTCCTGTTGCGCAAAGCTCCGTTGATA
TCTCCTTCCAGAGAGGTGGAGCCGATGCTGCTACTGGTGCGATGGTGGTGATGCAGCCACCAGCACAGCCGGTGAAGAAAAGCAGG
AGAGGACCTAGGTCTAAGAGTTCTCAGTATAGAGGTGTTACTTTCTACAGGAGGACTGGCAGATGGGAGTCTCATATCTGGGATTG
TGGTAAACAAGTTTATTTAGGTGGATTTGACACTGCTCATGCTGCAGCTAGGGCGTATGATCGAGCTGCTGTCAAGTTCAGGGGTC
TGGAGGCTGACATCAATTTCATTATCAGCGATTACGAAGAGGATCTCAAGCAGATGGCGAATCTTTCCAAGGAGGAGCTTGTGCAA
GTACTTCGGCGACAGAGCTCTGGTTTCTCCAGGAGTAATTCAAGATACCAAGGAGTTGCTTTGCAAAAGATTGGCGGGTGGGGAGC
TCAAATGAAGCAGCTCAATGGAAACATGTAATCAGCTTCTCTCCGGAATCTAACATGCTTATATTCATTGTGGTATTTGTCTGAAT
GTGCTTTGTCTAAAAATAGTGAAGTGCCTCAGATAAAAAGTTGGTTATATTTCGTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002862955 hypothetical protein ARALYDRAFT_497236 [Arabidopsis lyrata subsp. lyrata] | 735 | 2e-075 |
| BAJ34032 unnamed protein product [Thellungiella halophila] | 718 | 2e-073 |
| NP_200820 AP2-like ethylene-responsive transcription factor TOE2 [Arabidopsis thaliana] | 701 | 1e-071 |
| NP_001190576 AP2-like ethylene-responsive transcription factor TOE2 [Arabidopsis thaliana] | 701 | 1e-071 |
| CBI16240 unnamed protein product [Vitis vinifera] | 659 | 1e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LVG2 AP2-like ethylene-responsive transcription factor TOE2 | 701 | 6e-073 |
| P47927 Floral homeotic protein APETALA 2 | 573 | 4e-058 |
| Q9SK03 Ethylene-responsive transcription factor RAP2-7 | 563 | 6e-057 |
| Q9FH95 AP2-like ethylene-responsive transcription factor TOE3 | 541 | 2e-054 |
| Q6PV68 AP2-like ethylene-responsive transcription factor SMZ | 503 | 6e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SW78 Protein AINTEGUMENTA, putative | 639 | 2e-064 |
| B9SGS1 Floral homeotic protein APETALA2, putative | 581 | 8e-058 |
| Q84U23 LIPLESS2 | 568 | 3e-056 |
| Q2Z2G5 APETALA2-like protein | 566 | 4e-056 |
| Q9AXI4 APETAL2-like protein | 564 | 8e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G60120.1 TOE2; DNA binding / transcription factor | 701 | 6e-074 |
| AT4G36920.1 AP2 (APETALA 2); transcription factor | 573 | 4e-059 |
| AT2G28550.1 RAP2.7 (RELATED TO AP2.7); DNA binding / transcription factor | 563 | 6e-058 |
| AT2G28550.2 RAP2.7 (RELATED TO AP2.7); DNA binding / transcription factor | 563 | 6e-058 |
| AT5G67180.1 AP2 domain-containing transcription factor, putative | 541 | 2e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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