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Information for unigene UN12305
| FASTA Sequence |
| Unigene ID: UN12305 | Length: 1055 |
SSR | | GGGCAACGATGCTGCTGCTGCTGCTGTGATCGAAATGGCGTCGTCTTCTCCAACCCAGCGTACTCACGTCCCGATCCCTCCTGAGC
CAGGAGGAAGGTCATTGACGCAAGATGCTGATGAGCCACCTGTTCCTATTCACATAGTGACAGAGCCTTTGCAGCTTCCCGCTGAT
TTCTTAAACCCTTCTCCTGAAAACAAGCTGGTCGTTGGTTTTGACTGCGAGGGTGTTGACCTCTGCCGACATGGCAAGCTTTGTAT
CATGCAGATTGCATTCCCTAATGCAATATACCTGGTTGATGTCATCCAAGGTGGAGATGTGCTTATGAGAGCATGTAAGCCTGCAC
TCGAGTTTACTTACATCACCAAAGTCATTCACGATTGCAAACGTGACAGTGAGGCCTTGTACTTTCAGTTTGGGATAAGGTTGCAC
AATGTTGTGGACACTCAAATTGCTTTTTCTCTGATAGAAGAACAAGAAGGCAGGAGGAGACCTCTAGATGACTACATATCGTTTGT
TTCCCTCCTTGCTGATCCACGCTACTGCGGCATATCTTATGATCCGTGCAGCCGCAGATGATGTCCGCTTCCTTCTGTATCTTTAT
CACAAAATGATGGCCAAACTGAGCCAGCGGTCATTATGGCATTTGGCAGTTCGTGGCTCTTTGTACTGTAGGTGTTTTTGCTGCAT
GAATGATACTGATTTTGCTAATTGGCCAACTGTCCCGCCTTTTCCAGATAACTTGAAGATCGGAGATCAATGTCCTGAAGAAGAAA
TATTGTCAGTGCTTGATGTTCCACCAGGAAAGATGGGACGTGTGATTGGAAGGAAAGGAGCATCAATCCTCGCCATTAGGGAAGCT
TGCAAGTATATATACTCTCTCCTTCATGTTGTTGTAGCTCGAAAACTTGAACACCACATATGGTCTCTATAAAAGTGATGTTTTCC
TCTGTCTTGCAGTGCTGAAATTTTAATTGGAGGGGCAAAGGGTCCACCTGACAAGGTTGGCCTTAGTCCATTGGACATAAAATATG
TTTGAATTAAATGATTTTTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880724 hypothetical protein ARALYDRAFT_481448 [Arabidopsis lyrata subsp. lyrata] | 859 | 7e-090 |
| NP_001031418 3'-5' exonuclease and KH-I domain-containing protein [Arabidopsis thaliana] | 843 | 5e-088 |
| NP_565612 3'-5' exonuclease and KH-I domain-containing protein [Arabidopsis thaliana] | 843 | 5e-088 |
| XP_002276186 PREDICTED: hypothetical protein [Vitis vinifera] | 731 | 5e-075 |
| XP_002516481 3'-5' exonuclease, putative [Ricinus communis] | 682 | 2e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8CDF7 Exonuclease 3'-5' domain-containing protein 1 | 175 | 6e-012 |
| Q8NHP7 Exonuclease 3'-5' domain-containing protein 1 | 174 | 8e-012 |
| Q6NRD5 Exonuclease 3'-5' domain-containing protein 1 | 162 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O82306 At2g25910/F17H15.6 | 843 | 3e-088 |
| Q2V457 Putative uncharacterized protein At2g25910.2 | 843 | 3e-088 |
| A5B4I6 Putative uncharacterized protein | 731 | 3e-075 |
| B9RRW2 3'-5' exonuclease, putative | 682 | 2e-069 |
| B9HE01 Predicted protein | 662 | 3e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G25910.1 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | 843 | 2e-090 |
| AT2G25910.2 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | 843 | 2e-090 |
| AT2G25920.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 84 Blast hits to 79 proteins in 34 species: Archae - 0; Bacteria - 23; Metazoa - 11; Fungi - 12; Plants - 23; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | 160 | 3e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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