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Information for unigene UN12316

FASTA Sequence
Unigene ID: UN12316Length: 963 SSR 
GGAAAACTTTATGTAAAATAATAAAACCAACTTGTAAACTCGTTTCTTCTCTCTCTCTCTCTCTCTGCTTTCAAAATTGAAAAATT
CATTTTCCTAGAGAGAGATTGCCACTGTTTAGGTCCCGATGTCAATCACTGACCGTCACAATCCGAGCGCGGAGACAAAGACGAAG
AAGAAGAATCTCTTCAGGCTATTCCCTTTCTGGCAGAGGAAAACCACCACCACCTCCTCTTCTCCCTCGTCGACTCAGAATCACCC
CACCCGCCACCGTCATCGGAATAATACGGATGTCTCCAACTCCAAGCCGTCCTCCTCCTCCGCCTTGTCTGTCTCTTCCGTCGCGA
GATCGATTCTCCCCGCTCGACGTCGTCTCCGGCTAGATCCTTCTAGCTATCTCTATTTCCCTTATGAAGCTGGTAAACAAGTGAGA
AGCGCAATCAAGCTTAAGAACACTAGCAAGTCTCATACTGCCTTCAAGTTCCAAACAACTGCACCGAAGAGTTGTTACATGCGTCC
TCCTGGTGGTGTTTTGGCTCCTGGAGAGAGCGTCTTTGCTACTGTGTTTAAGTTCGTGGAACACCCAGAGAACAATGAGAAACATC
AGTTGAACCAGAAGAGCAAGGCTAAGTTTAAGATCATGAGCCTCAAAGTCAAACCCGGTGTTGACTTTGTCCCTGAGTTGTTTGAT
GAGCAAAAAGATCAAGTCACCGTGGAGAGGGTTCTTCGGGTCATTTTTCTTGATGCAGAGCGCCCAAGTGCTGCACTGGAGAAACT
GAAACGTCAACTGGAAGAAGCTGAAGCTGCTGTTGAAGAAAGAAAGAAGCCTCTGCCGGAGACAGGGCCTTGCGTTGTCGGGGAGG
GTCTTGTGATTGACGAATGGAAAGAGAGAAGAGAGAAGTACCTTGCTAGACAACAAGTCGAAGCCATAGATTCTTCTTCCTAAAAT
GCTGAGAGCAACGTGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34304 unnamed protein product [Thellungiella halophila]11222e-120
XP_002864302 membrane-associated mannitol-induced [Arabidopsis lyrata subsp. lyrata]11052e-118
NP_568804 membrane-associated mannitol-induced protein [Arabidopsis thaliana]10747e-115
AAB41326 membrane associated protein [Arabidopsis thaliana]9984e-106
BAA97133 membrane associated protein [Arabidopsis thaliana]9895e-105

Swiss-Prot top hits (Blast detail)Scoree value
Q9Z270 Vesicle-associated membrane protein-associated protein A1381e-007
Q9WV55 Vesicle-associated membrane protein-associated protein A1371e-007
Q0VCY1 Vesicle-associated membrane protein-associated protein A1352e-007
Q9P0L0 Vesicle-associated membrane protein-associated protein A1352e-007
Q5R601 Vesicle-associated membrane protein-associated protein A1352e-007

TrEMBL top hits (Blast detail)Scoree value
Q1ECE0 At5g5411010745e-115
P93040 Membrane associated protein9983e-106
Q9LVV9 Membrane associated protein9893e-105
Q56YB2 Membrane associated protein (Fragment)9132e-096
A5ARH9 Putative uncharacterized protein9088e-096

Arabidopsis top hits (Blast detail)Scoree value
AT5G54110.1 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule10861e-118
AT4G21450.1 vesicle-associated membrane family protein / VAMP family protein7973e-085
AT4G05060.1 vesicle-associated membrane family protein / VAMP family protein7113e-075
AT4G21450.2 vesicle-associated membrane family protein / VAMP family protein4873e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
71  50%

Unigene MembersMember information