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Information for unigene UN12331
| FASTA Sequence |
| Unigene ID: UN12331 | Length: 810 |
SSR | | GGATGAGTGGGGCGGGAGTGCCTGACTTCTTCTACAGAGAAGCTCAACGTCTTGGCTATGTAGCTCGTTCCGCTTTCAAGCTTCTA
CAGATTCAAAAGCAGTACAAGCTCATCAAACCAGGATCCTCTGTTCTTGACCTAGGTTGTGCCCCTGGTGCTTGGCTTCAGGTTGC
CTGCCAAAGCTTAGGTCCGCTTAGAAGTGGTGGAAACGTCGTTGGTATGGATATAAAGAAGGTGAAGGTTCCTCCACTGTGTGATG
CTCGAGTGCAGACCATTAGCGCCGATGTTTTAAACTTTCCCAGACAAAATATTAGGGAGTTATCTCCTCAGCACATGGGGTTCTCG
GTGGTTCTATCAGATATGTGTCACTCAGTAACTGGAATCACCAGTAGAGATGCAGCTCTCTCTGCTGAACTGGGAATGCGAGCTCT
TAATCTGGCTGTTGGTCAAGCTGCCATCTCTAAGTCACTTGATGATGATGATGATGATGATGACGATGATGGAGGAGATGAGGAGA
GTCGTCTTGGTGTGCTTAGGCATGGAGGTCATCTTGTCATCGAGCTTCTAGAAAGCGAGGATGCTCAAGATTTTGCGAGGATTTGC
AAACCCATCTTTAACAAGGCATCTTGGTTGAGGCCTAAAGCTACAAGACCATCATCTCGAGAGATCTACTTGATTTGCCAGGGATT
TCGTTCATAAGAAAAAGTTTTTCATATACAAATGAAGATTCAATGATTACTCTTTTTATGTTGTTTACTACAAAGGATCAGAAAAG
AAATAATATAAAGCAGCAAACAGATTTTTGCGTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196887 FtsJ-like methyltransferase family protein [Arabidopsis thaliana] | 1047 | 7e-112 |
| XP_002871589 hypothetical protein ARALYDRAFT_325857 [Arabidopsis lyrata subsp. lyrata] | 1041 | 3e-111 |
| XP_002531569 ftsj, putative [Ricinus communis] | 864 | 1e-090 |
| XP_002283276 PREDICTED: hypothetical protein [Vitis vinifera] | 842 | 4e-088 |
| XP_002316277 predicted protein [Populus trichocarpa] | 834 | 3e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A0LGZ0 Ribosomal RNA large subunit methyltransferase E | 241 | 9e-020 |
| Q58771 Ribosomal RNA large subunit methyltransferase E | 224 | 8e-018 |
| Q18E61 Ribosomal RNA large subunit methyltransferase E | 223 | 1e-017 |
| Q1H387 Ribosomal RNA large subunit methyltransferase E | 201 | 4e-015 |
| Q2W0P2 Ribosomal RNA large subunit methyltransferase E | 200 | 5e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SXH3 FtsJ | 1047 | 5e-112 |
| B9T000 Ftsj, putative | 864 | 8e-091 |
| B9HTH2 Predicted protein | 834 | 2e-087 |
| B8AMC5 Putative uncharacterized protein | 708 | 9e-073 |
| Q10BD5 FtsJ-like methyltransferase family protein, putative, expressed | 708 | 9e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13830.1 FtsJ-like methyltransferase family protein | 1047 | 3e-114 |
| AT4G25730.1 FtsJ-like methyltransferase family protein | 157 | 4e-011 |
| AT5G01230.1 FtsJ-like methyltransferase family protein | 128 | 1e-007 |
| AT5G01230.2 FtsJ-like methyltransferase family protein | 121 | 7e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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