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Information for unigene UN12337

FASTA Sequence
Unigene ID: UN12337Length: 824  SNP
CTAGATGAATTCAGTTTTAATATATAGAAACTTACAAATTTTCAAAAAGAGACAAGATCTGCATCATTTCTCTATATAATGACATT
AGTTTAATTTGCTCGGAAAGTTATAATTAATTATTTTAATTACCCATTTTTGTATTTTATCATATTACACTTTTATATATAAGAAA
ACAAACAATTGATGATGCAGTAAAATAACGATCTCTGAGATAGAAGTCGTAATCATATTTAGAAGGTGACGTCAGGAACGATTCCG
AGCTCCTTAAAAGCGGCGGGACATTCAGCTGACGGCGTCTTAACCATGAAACCGAGAGGGTTAACGATACGTGTCTCGTGAGAGAC
GATACCGTCATTTGCCGTCAGGCTAACCTTAGCGGCGTTACGTAAGTAAGCATCTTGGCTGACGTCACTGCAAGCACTGTCAGGTG
ACTGGAGGAGAACGAGCTCGCAGACTTCCTCCTCGTGGTCACCGGTCACTTCCATTGTGTAGCTGCCTGTTTTGTCGGTCACCGCT
TCTTTTGTCAACGCAACGGTTCCGTTTGTTCTGCTCCTGCACTCTAGCTTCACTTTCGCTCCTTCAAGGAATTTGCTGAGACGGGT
AACGAATTGGACACGGCATGTGTCACAGTAAACCGATCCCTGAATTTTGAAACTGTCAAAGTCATCGGCATCGGCCATAGCCTTGC
CGGCTAGAGACGACAGGCACAAGGCGGAGACAAAGAAGAAGATAGCCTTGGTTGCCATTTGATTGACTAAGTTACAAGATTTGTCT
TTCTTCTCCTTTTGAATCGTTTTCTTTGTTGAGATTAGAGAAGAGGACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA16739 pollen-specific protein - like [Arabidopsis thaliana]8066e-084
NP_567562 pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]7994e-083
XP_002870034 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]7896e-082
XP_002863445 hypothetical protein ARALYDRAFT_494394 [Arabidopsis lyrata subsp. lyrata]7815e-081
NP_568650 pollen_Ole_e_I-domain containing protein [Arabidopsis thaliana]7781e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q8LGR0 Pollen allergen Che a 14362e-042
O49813 Olee1-like protein4174e-040
P33050 Pollen-specific protein C133045e-027
P13447 Anther-specific protein LAT522973e-026
O82015 Major pollen allergen Lig v 12874e-025

TrEMBL top hits (Blast detail)Scoree value
O49527 Pollen-specific protein - like8064e-084
Q6NMJ2 At4g185967993e-083
Q680L9 At5g458807787e-081
Q8L9P9 Ole e I (Main olive allergen)-like protein7698e-080
Q9FJ48 Ole e I (Main olive allergen)-like protein7195e-074

Arabidopsis top hits (Blast detail)Scoree value
AT4G18596.1 pollen Ole e 1 allergen and extensin family protein8001e-085
AT5G45880.1 pollen Ole e 1 allergen and extensin family protein7793e-083
AT1G29140.1 pollen Ole e 1 allergen and extensin family protein6503e-068
AT4G08685.1 SAH72345e-020
AT5G10130.1 pollen Ole e 1 allergen and extensin family protein2051e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
118  50%
 
102  13%
 
84  25%
 
122  13%

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