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Information for unigene UN12370
| FASTA Sequence |
| Unigene ID: UN12370 | Length: 1365 |
SSR | | GTAGGTAATTTGTTGTGCCATTTTTTCATTTTATTTTTCTAGTGAGAGTGAAATTCCCCAAAGAAGTAATCACATGGTGTTCTTTC
TCTGATTTCACCTCACATTTACTTACAACACACAATACAAGTCAACGAGAGCTACACGGAAACATCTGAAGATTATAAAAGCACAC
AAAATTACCCTTTTGCTTAACTTTTCCACCTTCTTCATCTATTAGTATCAATTTTACATACATCTCCCTGATAAATGAAACCTTGG
CCCATAGGTTTAAGCATTGCCTCCTTCTGGTAATGTGATCAAACGAGTACTTGAGTCATAGACCATCGCCGTTCCACATCCGGAGC
ATTTAACATTGTTGGTGGAACCATCATTGGAGATGGATAGTATAGTTCCAAAGAAGGAGGTATTCTCAGTTCCACAGTTTGGACAA
GGGCCCTTCAAGATCAAGGAGTCTCTGATGATCAGCTTGGTGAGTGATAGCGCCAGATACACAATTGCAGGCACCGCAGCGAACCA
TGTGAAAATGAAACTGAATGGTTCCGGAAGCTCGAGCAAGTAAGTGATTTCAAAACCTGTAAGGTCATCAAGGAAGAAAAACAGTC
CGAGAGCAACAACGGTTGCTGGTACATTCAACAGGAACATTTTGAAATAATCTACTGCAAGATCACTGTAAACCTTTTTACTACGA
AGACTGCATCTTGGACCCTCACACACAATCTCACTTCCATCCATCTTCAGTTTCATTTTCAGCTTGTCGTATTCTTCATCAGTCAT
GATTGGATTGCCAGACACATAAGCCATTGAAGCTTCAAGGAATCTTTGTTCATCGGAACTTAGCATGACAACACTGCTTCCTTCCC
ACATCAACTCTTCTTTTAGGTTATCAAACTCTTCGTTAGACATAACAGCCTTGCCTTCGTAATAGAATGATTGCATCGCTTGGAGA
AACTCTTGCTCCATTTCACCGATTGATCTCTTCTCGTTCTTGTTGATGCTACAGTAAGGTAAGATCTTGCTGTCAACTTCTTCCCC
ACCCACCTGACCTGACTGATCGGTAGTGGCTTTGACGGGTAATAAGAAAAGTCTTCGTCTGAGAGAAATGGATCGTTCATGGCTGA
AGTGAGCAGAGTGTGTCCTCGAAGGAGGAGATGAACAAGTGGTGGTGGTGGTGGGTTTGCGAGAAGTTGGAGAGTGAAATCGAGGG
ATTGTCAGAGTAAACGCCATCTTACTACACATGTTTGTTTTTCTTCTTCTTCTTCTTCCGGGAGAGAGACGATTGAGATTGTTCTT
TCTTGTCTTTTCAGGAGAAAGGAAGAAAAAAAAAAGATGTGAGGTTTGGACTTGTGGTTGAGAATAATGATGGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192933 PGR5-like protein 1B [Arabidopsis thaliana] | 1403 | 8e-153 |
| XP_002874736 hypothetical protein ARALYDRAFT_490014 [Arabidopsis lyrata subsp. lyrata] | 1387 | 6e-151 |
| NP_567672 PGR5-like protein 1A [Arabidopsis thaliana] | 1344 | 6e-146 |
| XP_002869800 hypothetical protein ARALYDRAFT_492575 [Arabidopsis lyrata subsp. lyrata] | 1328 | 4e-144 |
| NP_001078432 PGR5-like protein 1A [Arabidopsis thaliana] | 1326 | 7e-144 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8GYC7 PGR5-like protein 1B, chloroplastic | 1403 | 3e-154 |
| Q8H112 PGR5-like protein 1A, chloroplastic | 1344 | 2e-147 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RBZ1 Putative uncharacterized protein | 1246 | 9e-135 |
| C6TJX7 Putative uncharacterized protein | 1207 | 3e-130 |
| A9PGK5 Putative uncharacterized protein | 1177 | 9e-127 |
| B9GW41 Predicted protein | 1172 | 3e-126 |
| B9GKR5 Predicted protein | 1170 | 6e-126 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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