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Information for unigene UN12403

FASTA Sequence
Unigene ID: UN12403Length: 1662 SSR 
GGGGGGTCACACGCGATCTTAGTGCCCATTTCTCTCTTTTGTCTTTCCTCTCTCTCTCTCTCTTTCCCTTGTAAGAAAAAAGGAAA
GTTCTCTCGCAAAGATCCAATTTTGACGATCCAAATCGGACAAAAGTTGAATTTTCAGACAGAGATATGTCGTGCTCATCCTCGTC
TGGATCAGAAGGTGAAGAAGAAGGTTTCGATTCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATCGGAGACCCTTTCTCCGGTG
GACGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTCTCCACCGTCTGGCTTGCCTACGATACTCTCTCCTCTAGCTACGTT
GCTTTGAAGATTCAGAAGAGCGCACAGCAATTCGCACAAGCCGCACTTCACGAAATCGAGTTCCTCTCAGCTGCAGCCGACGGAGA
TCTCCAAAACACCAAATGCGTCGTCCGTCTCATCGACCATTTCAAGCACGCCGGCCCCAACGGGCAGCATCTCTGCATGGTGCTCG
AGTTTCTCGGCGACAGCTTGCTCCGTTTGATCAGATACAACCGTTACAAAGGTCTGAAGATGGATAAAGTCAGGGAGATTTGCAGA
TGCGTGCTCACTGGTTTAGATTACTTGCACCGTGAGCTCGGTATGATCCACTCTGATTTAAAACCTGAGAATATTCTTCTCTGCTC
CACCATTGACCCTGCTAAAGATCCGGTTAGATCCGGGTTGACTCCGTTGCTAGAAAAGCCTGAGGGGAACGCAAACGGTGGCGGTG
GTTCTTCCACGATGAATCTGATTGAGAAGAAGTTGAAGAGGAGAGCTAAAAGAGCGGTTGCTAAGATATCGGAGAGAAGAGTCTCG
ATGGTTGGTGGAGAAGCATCGTCGAAGACGGAGGAGAGGAGTCTTGATGGGATTGATATGAGATGCAGAGTGGTTGACTTCGGTAA
CGCTTGCTGGGGTGATAGACAGTTTGCTGAGGAGATACAGACGAGACAGTACAGAGCTCCTGAAGTGATACTGAAGTCTGGATACT
CTTTCTCTGTTGATATGTGGTCTTTTGGTTGTACGGCTTTCGAGCTTGTCACTGGGGATATGATGTTTGCTCCTAAAGAAGGGAAT
GGTTATGGAGAAGACGAGGATCACCTTGCTCTTATGATGGAACTTTTAGGAAAAATGCCTAGAAAGATTGCTATTGGTGGAGCGAA
GTTTAAAGACTACTTTGACAGACATGGAGATTTGAAGAGGATACGGCGGTTGAGGTATTGGCCGCTAGATCGTTTACTGGTGGATA
AGTACAAGCTTCCGGAAGCAGAAGCAAAGGAGTTTGCAGAGTTTTTGAGTCCTATTCTTGAGTTTGCGCCAGAGAAACGACCTACT
GCTCAGCAGTGCTTGGAACATCCGTGGATGAATGTAGTAAGTACACTGAACAAAAATGCAGATAATGTAGAATCTCAAATGAGAAA
CTTGCACATCAAAGGGTGAAAGGCAACTCCCCCCTTTTTCTTTTTTTTTTTTCATACATGTTTTCTTTTTGAACAATTTCGTTATT
TTTTTGTTTAATTGTTCTTTTTTTTTTGGAGCTATGGATATGATTATTGGTTAAACATCGACTTCATTTGTTGCTTAAAAAGAAAA
TGCGTTGTAGTGAATGATTAAATTGACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869083 kinase family protein [Arabidopsis lyrata subsp. lyrata]21243e-236
NP_195275 protein kinase family protein [Arabidopsis thaliana]21216e-236
CAC03675 SRPK1 [Arabidopsis thaliana]21126e-235
NP_974689 protein kinase family protein [Arabidopsis thaliana]20562e-228
XP_002884065 hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp. lyrata]19657e-218

Swiss-Prot top hits (Blast detail)Scoree value
O70551 Serine/threonine-protein kinase SRPK14903e-048
Q96SB4 Serine/threonine-protein kinase SRPK14832e-047
Q5RD27 Serine/threonine-protein kinase SRPK14832e-047
Q86A12 Probable serine/threonine-protein kinase sky14671e-045
P78362 Serine/threonine-protein kinase SRPK24671e-045

TrEMBL top hits (Blast detail)Scoree value
O81783 Protein kinase - like protein21214e-236
Q9FYB4 SRPK121124e-235
Q9SHL5 At2g1753019646e-218
B9H679 Predicted protein18429e-204
B9S6V7 Srpk, putative18241e-201

Arabidopsis top hits (Blast detail)Scoree value
AT4G35500.1 protein kinase family protein21265e-239
AT4G35500.2 protein kinase family protein20665e-232
AT2G17530.1 protein kinase family protein19643e-220
AT2G17530.2 protein kinase family protein15593e-173
AT3G53030.1 SRPK4 (Ser/Arg-rich protein kinase 4); kinase/ protein kinase6661e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  20%
 
181  20%
 
211  20%
 
81  20%
 
91  20%

Unigene MembersMember information