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Information for unigene UN12406

FASTA Sequence
Unigene ID: UN12406Length: 1425  SNP
GGATACATACATAACTTGCTTACTACGCAAAGTCACACATCGATCAAACTCTAGTGAAAACCTAGTTGGTTTAATATGGTGATGGT
GGGTACAACCTCTTCGTTGGATGAGATCAGAAAGGCACAGAGAGCAGATGGCCCTGCAGGGATTTTGGCGATAGGCACGGCCAACC
CTGCGAACCATGTGCTCCAAGCGGAGTATCCTGACTACTACTTCCGCATCACCAACAGTGAACACATGACCGACCTTAAGGAGAAG
TTCAAGCGCATGTGCGATAAGTCGACAATAAGGAAACGACACATGCACTTGACCGAAGAGTTCTTGAAAGAGAACCCTAACATGTG
CGCCTACATGGCTCCTTCTCTCGATGCTAGACAAGACATCGTGGTGGTTGAAGTCCCCAAGCTAGGCAAAGAGGCAGCGGTGAAGG
CCATCAAGGAGTGGGGTCAGCCAAAGTCCAAGATCACACACGTTGTCTTCTGCACCACCTCAGGTGTTGACATGCCTGGTGCTGAC
TACCAGCTCACCAAGCTCCTAGGCCTTCGCCCTTCAGTCAAGCGTCTCATGATGTACCAGCAAGGTTGCTTCGCCGGCGGCACTGT
CCTCCGTCTCGCCAAGGACCTCGCTGAGAACAACCGTGGCGCACGTGTCCTCGTGGTCTGCTCCGAGATCACAGCCGTCACCTTCC
GTGGCCCTTCTGACACCCACCTTGACTCCCTCGTAGGACAGGCCCTCTTCAGTGACGGCGCAGCCGCGCTCATCGTCGGTTCGGAC
CCTGATGTCTCCGCTGGAGAGAAGCCAATCTTCGAGATGGTGTCTGCTGCTCAGACCATCCTCCCTGACTCGGACGGTGCCATAGA
TGGACACTTGAGGGAAGTGGGACTAACCTTCCATCTCCTCAAGGACGTCCCTGGACTCATCTCCAAGAACATTGAAAAGAGTTTGG
ACGAAGCTTTTAAACCGTTGGGGATAAGTGACTGGAACTCCCTCTTCTGGATAGCTCACCCTGGTGGTCCAGCGATCCTTGACGAC
GTTGAGAAAAAGCTAGGACTCAAGGCTGAGAAGATGAGAGCCACACGTCACGTGTTGAGTGAGTATGGAAACATGTCTAGCGCGTG
CGTCCTCTTTATCTTGGATGAGATGAGGAGGAAGTCTGCGGAAGATGGTGTGGCCACGACAGGTGAAGGGTTGGAGTGGGGTGTCT
TGTTTGGTTTCGGACCGGGTCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAAGCTCTCTTCCTATAAAT
GCCTACCTACCCTCACATACTTACCATCATCATCTTGTCTTTGTGTTTTTTTTTCCTATCAATTTAAGATAATATTTGTAATGCAA
TAATTAAGGAAGCATTCATTTAATGTGAAACATGTGGACTTGCTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC31914 chalcone synthase B2 [Brassica napus]20292e-225
O22652 RecName: Full=Chalcone synthase; AltName: Full=Naringenin-chalcone synthase20256e-225
1609233A chalcone synthase 320051e-222
P13416 RecName: Full=Chalcone synthase 1; AltName: Full=Naringenin-chalcone synthase 120051e-222
P13417 RecName: Full=Chalcone synthase 3; AltName: Full=Naringenin-chalcone synthase 320032e-222

Swiss-Prot top hits (Blast detail)Scoree value
O22652 Chalcone synthase20253e-226
P13416 Chalcone synthase 120056e-224
P13417 Chalcone synthase 320031e-223
Q9SEP2 Chalcone synthase19609e-219
P13114 Chalcone synthase19528e-218

TrEMBL top hits (Blast detail)Scoree value
O81479 Chalcone synthase B2 (Fragment)20291e-225
D2CFP6 Chalcone synthase20003e-222
B1N7J8 Chalcone synthase19994e-222
B1N7K3 Chalcone synthase19994e-222
B1N7K7 Chalcone synthase19994e-222

Arabidopsis top hits (Blast detail)Scoree value
AT5G13930.1 TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase19535e-219
AT4G34850.1 chalcone and stilbene synthase family protein7205e-076
AT4G00040.1 chalcone and stilbene synthase family protein7072e-074
AT1G02050.1 chalcone and stilbene synthase family protein6929e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  11%
 
62  22%
 
183  33%
 
92  22%
 
81  11%

Unigene MembersMember information