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Information for unigene UN12429

FASTA Sequence
Unigene ID: UN12429Length: 1175 SSR 
CTTAAGAGACCGAAGGAAGCGAGTGACGACGTCTCTGTCTCTGTCTCTAGGTCTCTTGGCTTTTCCTCCGTCACAGTCACCGTGGA
ACACTGTGAATGGCGCCTAGAGGAAGGAAAAAGAAGGCTGGAATGATGCGAGAGGATGCAGCACGAGATGCCATGAGAGCTTTTGG
GTTTGCGGAGCGTCTTATCAATGTGTCTATCAAGGAATTGCTTGAGGTGTATGGTGCGGAGGGGTGGTTTCTGATCGAAGAGTGTA
GTTACTTGGTGCTGTTAAACAAATGCCTTGAGAAGTCAGCTGAACAAGGCCCAAATTTGCCTGAAGATAGGACTGAAGAGAGGGCT
GAGGAGGAGCAAAACGATGAGATGATGGTTGAGGCAGAAAAAAAACAAAACGATGAGATGGTGGCTGAGGAGGCAGAACCAGAACC
AGAGCAGAACCATGATGAGATGGTTGAAGCTGCACAAGAACAAAACGTTGAGATGATGGTTGAGGCAGAGCAAGAACACACGCCTC
AGCAAGAAGAAGAAAAGGAGCAAGAAGAGCAGCGTGTTGAGGATGGAAGAGACCATGTCGGTAGCAACTCAACGTCTCTGTTGGGG
GTGTGTTGCCGAGACAGGTACAAAGGCTTGTCAGACTGAAGCTTTATCAACCACTAGCGAGACAGACATCTTGGACGGATCACCAG
CAGCAGGAGAATCATCAGTGATCGATTACACATCACCACCAGCAGCGTTTCCACCAGCAGGTTTTGCACAACATCCTTCTGCAGGT
GCCAATCTTTCCGGACGGGGTGGATGGATAAGTGATTCGGATGAGGATGAGGATCCAGATGATGGTGATGATGATGAGATGATTCA
GCTGACTCCAGAACCGCTCTGTGAAGAGCTTGAAGAGCTGATCAAGGAGATACGTGGAGAGAAGAAGAAGAAGAGGACCAGGTGGG
AAGACTAAGCTGAGCTCATAAGCTCCTCTGTAAGCAGCGTCAAAGTTAAGCTAAGAAGTAGAGTGAAAGAGAGTAAGTAGTATTAG
AACAAGTAAGGAGGAGTCGAGAGCAGCTCCTGTAAGTATCGCTTAAGTTAATTAAGCTAAGAAGTAGAGTGAGAGACTAAGTAGTA
TTGGTTTAAAACTTGATATGGTGATGTATATTTTGTTATTAAATCAGTTGCATAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_973643 Nucleolar histone methyltransferase-related protein [Arabidopsis thaliana]2924e-024
NP_001078027 Nucleolar histone methyltransferase-related protein [Arabidopsis thaliana]2924e-024
XP_002894018 predicted protein [Arabidopsis lyrata subsp. lyrata]2612e-020
XP_002879838 hypothetical protein ARALYDRAFT_903269 [Arabidopsis lyrata subsp. lyrata]2575e-020
XP_002526885 conserved hypothetical protein [Ricinus communis]1787e-011

Swiss-Prot top hits (Blast detail)Scoree value
Q01042 Immediate-early protein1443e-008
P54696 Myosin-H heavy chain1237e-006

TrEMBL top hits (Blast detail)Scoree value
A8MQW8 Uncharacterized protein At2g40020.32923e-024
Q3EBJ3 Putative uncharacterized protein At2g40020.22923e-024
B9SLL6 Putative uncharacterized protein1785e-011
Q1PFN1 Putative uncharacterized protein1732e-010
Q6E2A0 Putative uncharacterized protein1704e-010

Arabidopsis top hits (Blast detail)Scoree value
AT2G40020.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WIYLD domain (InterPro:IPR018848); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45248.5); Has 87 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 42; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).2922e-026
AT2G40020.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WIYLD domain (InterPro:IPR018848); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45248.5); Has 5871 Blast hits to 3101 proteins in 244 species: Archae - 15; Bacteria - 225; Metazoa - 2760; Fungi - 445; Plants - 149; Viruses - 184; Other Eukaryotes - 2093 (source: NCBI BLink).2922e-026
AT2G40020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WIYLD domain (InterPro:IPR018848); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45248.5); Has 5859 Blast hits to 3090 proteins in 244 species: Archae - 15; Bacteria - 222; Metazoa - 2729; Fungi - 459; Plants - 148; Viruses - 184; Other Eukaryotes - 2102 (source: NCBI BLink).2365e-020
AT1G45248.4 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WIYLD domain (InterPro:IPR018848); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40020.3).1731e-012
AT1G45248.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WIYLD domain (InterPro:IPR018848); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40020.3); Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1702e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  100%

Unigene MembersMember information