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Information for unigene UN12435

FASTA Sequence
Unigene ID: UN12435Length: 932 SSR 
TTCGTCTTCATCGCTGTTCTTCCATTATAGACGAATCTCTCTCATTTAAATTTCCTCCAACGCCCCTCTCTCTCTCTCTCTCGATT
TCTTTATCGCCGGAGCTCGTAGTCCACGGCGGGGAGAGATGGCTCCTAACGATCCCAAAAACGGCGGTGGTTTCTTCGCGTCTCTT
GCTTCCTCGATCTCAAGCTTGGGATCGGCCATGACCAAATCAGTTAACGGTTTGGTTGGGTATGAGGGACTTGAAGTTATTAACCC
TGAAGGAAGTACAGAGGATGCAGCTGAGGAAGCTAACAGAGGAAGATGGAAGCAAGAGGATCGAGATGGTTATTGGAAGATGATGC
AGAAGTACATTGGATCTGATGTTACATCAATGGTGACACTTCCTGTTATTATCTTTGAACCAATGACAATGCTCCAGAAAATGGCT
GAGTTGATGGAGTACTCGCATCTACTAGACCTGGCAGACGAAACGGAGGATCCTTATATGCGCATGGTGTATGCCTCATCTTGGGC
TATATCTGTGTACTATGCTTTCCAACGTACCTGGAAACCGTTCAATCCAATCCTTGGGGAGACTTATGAGATGGCTAATTATAATG
GTGTTAACTTCATATCCGAACAGGTCAGCCATCACCCGCCTATGAGCGCAGGTCATGCCGAAAATGAGCATTTCACTTATGATTGT
ACTTCAAAACTGAAAACAAAGTTTCTCGGCAATTCCATTGACGTTTACCCAGTAGGAAGGACACGTGTGACACTCAAAAGAGATGG
AGTGGTTCTTGACTTGGTACCTCCACTGACCAAAGTTCACAACCTAATCTTTGGACGAACTTGGGTCGATTCTCCTGGGGAAATGA
TCATGACCAACCTCACCACTGGTGACAAAGTCGTGCTTTACTTCCAACCATGTGGCTGGTTCGGATCTGGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882612 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]13855e-151
NP_187541 OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana]13703e-149
XP_002870951 hypothetical protein ARALYDRAFT_324883 [Arabidopsis lyrata subsp. lyrata]13604e-148
NP_195830 Oxysterol-binding family protein [Arabidopsis thaliana]13552e-147
XP_002532324 oxysterol binding protein, putative [Ricinus communis]12565e-136

Swiss-Prot top hits (Blast detail)Scoree value
Q54QP6 Oxysterol-binding protein 84202e-040
Q54ID7 Oxysterol-binding protein 113952e-037
Q9BXW6 Oxysterol-binding protein-related protein 13952e-037
Q8K4M9 Oxysterol-binding protein-related protein 13942e-037
Q91XL9 Oxysterol-binding protein-related protein 13933e-037

TrEMBL top hits (Blast detail)Scoree value
Q9SR33 Putative oxysterol-binding protein13702e-149
Q9LZM1 Putative oxysterol-binding protein13551e-147
B9T255 Oxysterol binding protein, putative12563e-136
A9PH21 Predicted protein12286e-133
C6TGH1 Putative uncharacterized protein (Fragment)12143e-131

Arabidopsis top hits (Blast detail)Scoree value
AT3G09300.1 ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding13701e-151
AT5G02100.1 UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding13557e-150
AT5G59420.1 ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding12087e-133
AT2G31030.1 ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B); oxysterol binding2964e-027
AT2G31020.1 ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A); oxysterol binding2947e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
81  50%

Unigene MembersMember information