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Information for unigene UN12453

FASTA Sequence
Unigene ID: UN12453Length: 1064 SSR 
GGATCACTCACTTGAAACCAAAAAGAAAAAGACTTTTGCTTTCTCTTCTTTTTTTCAAAAAGACACAAACTTGAGTGCCACTCTTT
CATCGTGAGAGGAAGATGGAAGGAGGAGGAGGAGGAGGATGAGGTGCCCACTACAACCCTCGAACAGTCGAAGAAGTCTTCCGAGA
TTTTAAGGGCCGCCGTGCTGGCATCCTCCGTGCTCTCACCACCGATGTGAAAGAGTTTTTCCAGCAATGCAATCCTGAGAAGGACA
ACCTTTGCTTGTATGGATTCCCGAATCAAGTGTGGGAAGTTAACTTACCAGCTGAAGAAGTGCCTCCTGAGCTCCCTGAGCCTGCG
CTCGGCATCAACTTTGCCAGGGATGGAATGCAGGAAAAAGAATGGCTTTCTCTTGTTGCTGTCCACAGTGATGCCTGGTTGCTTTC
TGTCTCCTTTTACTTCGGTTCAAGATTTGCTTTTGATAAAGCTGACAGGAAACGCTTGTTCAACATGATAAACGAGGTTCCTACTG
TATTTGAAGTTGTAACTGGAAGTGCTAAAAAACAAACAGAGGAGCAGCCTTCTTCAGTAACTAAAAATGGCAACAGATCCAAGTCT
AATTCAAAAGTGAGAGATTTAGATGTCAAAAGCTCAAGGAAGATACAGGTTAGTGAAGAGGATGAAGGAGCAGAGGAGGAAGGAGT
AGAGGAAGAGGATGAAGAAGAACACGGTGAAACCATGTGTGGAGCTTGTGGAGATAACTATGCTTCTGATTTCTGGATTTGCTGCG
ACATGTGCGAGAAATGGTTTCATGGGAAGTGTGTGAAGATCACTCCAGCTAGAGCTGAACATATCAAGCAATACAAGTGCCCTTCT
TGCAGCAACAAAAGAGCTCGACCCTAAAATGTTTTATTCCATTTGCCTTAGCTATCTATCAATCTATCCATCCCCCCCAAATTGTA
CAATGCACTTCGAAATCTATTTGTTGTTCAGACCGTTAGTTTGAAGCATGTCCATATTTACAACTTTGTATAACTCTCTCCAACTT
GTAGTCTTTGATAAGAATCGTTTCACAAAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873999 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]11822e-127
NP_197551 alfin-like 5 protein [Arabidopsis thaliana]11591e-124
XP_002276358 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]10845e-116
XP_002308535 predicted protein [Populus trichocarpa]10802e-115
XP_002276418 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]10774e-115

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g2621010296e-111
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011442e-008
Q8C9B9 Death-inducer obliterator 11372e-007
Q9W352 PHD finger and CXXC domain-containing protein CG174461326e-007
Q9BTC0 Death-inducer obliterator 11228e-006

TrEMBL top hits (Blast detail)Scoree value
Q5XEM9 At5g2051011597e-125
B9HD31 Predicted protein10801e-115
Q287W1 PHD finger/nucleic acid binding protein10737e-115
B9IKC9 Predicted protein10729e-115
B9RK32 DNA binding protein, putative10567e-113

Arabidopsis top hits (Blast detail)Scoree value
AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding11603e-127
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding10376e-113
AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding10295e-112
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding9051e-097
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding8817e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
112  67%

Unigene MembersMember information