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Information for unigene UN12472

FASTA Sequence
Unigene ID: UN12472Length: 820 SSR 
GCCGGAGTTTATGGAAAAGCAGCGCCAGATGATTTCACCGCTGATTATGAGCACTGGAAGCGTGTAGTGACCAAATCATACCTTAG
TGGTTTAGGAATTAACTGGGCATCTGTTAGAAATGTCATGGACATGAAAGCCGTTTATGGAGGATTTGCAGCGGCTCTAAGGGACA
TGAAAGTGTGGGTGATGAATGTGGTTCCAATAGACTCACCAGACACTAGCAATAATCTATGAACGAGGACTCTTCGGTATCTACCA
CGACTGGTGTGAATCTTTCAGCACTTATCCGAGATCATACGATCTTGTTCACGCCGACCATCTTTTCTCCAAACTCAAACAAAGGT
GCAATCTAACGGCTGTTGTTGCGGAAGTGGATCGGGTTCTGAGACCAGAAGGGAAAATGATAGTCCGGGACGATGCGAAAACCATA
CAAGAAGTGGAAGCGATGGTGAAAGCAATGAAATGGGAAGTTCATATGACTTACTCTAAAGGAAAAGAAGGTTTGCTTACTGTTCA
AAAGTCAATTTGGCGACCTGAAGATGTACAAACTCTCGCTTATGCTATCGCCGCTTGAGAACAAACATTGTTCGAGTCCCCCCATT
CTATTTGTACGTAAACACACATACACACACACACTTATTAACTCGTTATATCATCTTCCTCCTTTTTGTCGTCTTTTAGGGTTATT
CTTCCCATTTTTAGCGTTTTAAGTTTTAACTCTTGAGTTGAGTCGTTTGTTTGTATGTACTACTCGCACCTGTTTCTCGTCTTGAA
GATGCAGAACTTTCTTGTTTTGTAAATGTTAGATGATTACAGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201208 putative methyltransferase PMT26 [Arabidopsis thaliana]5602e-055
BAB10271 ankyrin-like protein [Arabidopsis thaliana]5602e-055
XP_002864883 hypothetical protein ARALYDRAFT_496597 [Arabidopsis lyrata subsp. lyrata]5575e-055
XP_002309924 predicted protein [Populus trichocarpa]4885e-047
XP_002306259 predicted protein [Populus trichocarpa]4885e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q8L7V3 Probable methyltransferase PMT265609e-057
Q6NPR7 Probable methyltransferase PMT244703e-046
Q0WT31 Probable methyltransferase PMT254622e-045
Q9SD39 Probable methyltransferase PMT274471e-043
Q9LN50 Probable methyltransferase PMT283636e-034

TrEMBL top hits (Blast detail)Scoree value
B9H4A8 Predicted protein4883e-047
B9HEX5 Predicted protein4883e-047
B9RRE2 ATP binding protein, putative4849e-047
A2WXN8 Putative uncharacterized protein4713e-045
Q0JH49 Os01g0883900 protein4713e-045

Arabidopsis top hits (Blast detail)Scoree value
AT5G64030.1 dehydration-responsive protein-related5608e-058
AT1G29470.1 dehydration-responsive protein-related4702e-047
AT1G29470.2 dehydration-responsive protein-related4702e-047
AT2G34300.1 dehydration-responsive protein-related4622e-046
AT2G34300.2 dehydration-responsive protein-related4622e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
121  33%

Unigene MembersMember information