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Information for unigene UN12485

FASTA Sequence
Unigene ID: UN12485Length: 663 SSR 
GATGTCAGGCTCTTTCTTGAATACTGAGAGTAATGGTACTGTGACTAAAACTGGTAGTCTTAGTGTATCTCTGGCTAGACCAGATG
GTCAGGTTGTGGGTGGTTGTGTTGCTGGAATGCTTGTTGCTGGATCACAAGTCCAGGTCGTTGTTGGAAGCTTTGTACCAGAAGTG
AAGAAACCTAAACAAAGCGCAGCGCGAGTTCAGAATCCTACTCCCGAGCCAGCTTCAGCACCAGCCAATATGTTGAGCTTTGGTGG
TGGTGGTGGTGGTGGACCAGGAAGTCCTCCTCGGTCTCAGGGACAGCAGCATTCAATCGACTCATCAGAGGAAAACGAAAGTAACT
CTCCGTTGCACCGTGGTAGCAACAATAACAACAACAATCATCACGGACTATTTGGAAACTCTCCGCCGCAACCACTTCACCAAATG
CCTATGCAGCAGATGTACCATCCTCACCTCTGGCCTGGCCACAATCCTACTCAGTAAACAGAGATGGTCCATCGCTCAGGGCTGTC
TGGTCTCAGTTTACTTCTCTGTTTCCGTTTACACATGTCTCCTTCAAATTAGATTGAGCTTTCTTACTCTCTCATCTTCTTCTTCT
TATGCTTCCTACTTTCTCTTTACTTCAGCTTTGGTTTTAGATAAATAGAGAGACAGAGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868028 hypothetical protein ARALYDRAFT_914905 [Arabidopsis lyrata subsp. lyrata]6182e-062
NP_567546 AT hook motif DNA-binding family protein [Arabidopsis thaliana]6012e-060
CAA11837 AT-hook protein 2 [Arabidopsis thaliana]5951e-059
CAA17138 putative protein [Arabidopsis thaliana]4193e-039
XP_002865172 hypothetical protein ARALYDRAFT_494313 [Arabidopsis lyrata subsp. lyrata]3298e-029

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q940I0 AT-hook motif nuclear localized protein 136012e-060
O49350 AT-hook protein 25958e-060
O49694 Putative uncharacterized protein AT4g179504192e-039
Q9FIR1 AT-hook motif nuclear localized protein 82713e-022
A5AT53 Putative uncharacterized protein2444e-019

Arabidopsis top hits (Blast detail)Scoree value
AT4G17950.1 DNA-binding family protein6082e-063
AT5G46640.1 DNA-binding family protein2712e-024
AT2G33620.1 DNA-binding family protein / AT-hook protein 1 (AHP1)1923e-015
AT2G33620.2 DNA-binding family protein / AT-hook protein 1 (AHP1)1923e-015
AT2G33620.3 DNA-binding family protein / AT-hook protein 1 (AHP1)1923e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
121  50%

Unigene MembersMember information