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Information for unigene UN12504
| FASTA Sequence |
| Unigene ID: UN12504 | Length: 828 |
SSR | | GGAAGGCAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCTTCTAATCAGTACCATCACCGTGATCTGAGATACTTAGTTGCG
TAACTCCCACCTCAGAGATTCTTTTCCTCCCACACAAGTTTCGAATCCTACCGCGATGGATCTCAATCTCGATGCGCCGCACTCTA
TGGGAACGACCATCATCGGCGTCACTTACAACGGAGGCGTCGTCCTCGGAGCCGACTCACGTACCAGCACCGGCATGTACGTAGCG
AATCGAGCTTCAGACAAGATCACACAGCTCACTGACAATGTCTACGTCTGCCGTTCTGGATCGGCTGCTGATTCTCAGGTTGTCTC
TGACTATGTCCGCTACTTCCTTCACCAGCATACAATTCAGCTGGGACAGCCTGCGACTGTTAAGGTTTCTGCAAACCTCATTAGGA
TGCTCGCTTACAATAACAAGAACATGCTGCAAACTGGCCTCATAGTTGGTGGCTGGGATAAGTATGAAGGCGGGAAGATCTACGGG
ATTCCACTTGGTGGAACTGTTGTTGAGCAACCGTTTGCTATTGGAGGGTCTGGCTCGAGTTATCTTTATGGGTTCTTTGATCAGGC
CTGGAAAGAAAACATGACCAAAGAAGAATCTGAGCAACTTGTTGTGAAGGCGGTTTCGCTAGCCATCGCCCGTGATGGAGCCAGTG
GAGGAGTTGTACGGACTGTCATATAAACTCCGAGGGAGTGACAGAAACTTCTACCCTGGGGATAAGTACAGCTATGGCATGAGAGT
GGAGCCCAGACTCCTTGTAGACATCTCACGCTGCTGGTCTGACCATGGCTATGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194858 proteasome subunit beta type-6 [Arabidopsis thaliana] | 972 | 3e-103 |
| XP_002527995 proteasome subunit beta type 6,9, putative [Ricinus communis] | 918 | 6e-097 |
| AAM64316 multicatalytic endopeptidase complex, proteasome precursor, beta subunit [Arabidopsis thaliana] | 913 | 2e-096 |
| XP_002283195 PREDICTED: hypothetical protein [Vitis vinifera] | 911 | 4e-096 |
| ACU13218 unknown [Glycine max] | 899 | 1e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LD27 Proteasome subunit beta type-6 | 972 | 2e-104 |
| P93395 Proteasome subunit beta type-6 | 890 | 5e-095 |
| Q55GJ6 Proteasome subunit beta type-6 | 564 | 3e-057 |
| Q3MHN0 Proteasome subunit beta type-6 | 534 | 1e-053 |
| O43063 Probable proteasome subunit beta type-6 | 533 | 1e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SPS6 Proteasome subunit beta type | 918 | 4e-097 |
| C6SVE5 Proteasome subunit beta type | 899 | 7e-095 |
| B7FGZ8 Proteasome subunit beta type | 893 | 3e-094 |
| A9PD83 Proteasome subunit beta type | 884 | 4e-093 |
| B9HBA5 Proteasome subunit beta type | 880 | 1e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G31300.1 PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase | 972 | 1e-105 |
| AT4G31300.2 PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase | 960 | 4e-104 |
| AT5G40580.1 PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase | 267 | 8e-024 |
| AT5G40580.2 PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase | 267 | 8e-024 |
| AT3G27430.1 PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase | 263 | 2e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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