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Information for unigene UN12506

FASTA Sequence
Unigene ID: UN12506Length: 734 SSR 
TTTTTTTAAAGGTCTCATTTAAGTTGTCGTGTTCTCTCATGATTCCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGAT
GATGAGACATGAGTTTTTGAGATAGAAGGAAGAGCTTTAAGAATCCCTTTGGTGTCCAACTCGGAACTTCTTGGCTTTACGTCCGA
TCTTGTCGCTAGAGCCTTCTTTCTTTCTTTCATGGTTTTAGCGACATAAGTTGGCCAGACCCAAGAACCCATCAGAAGTTGAGGGA
AGTATGAATTCAACAACAACACACTTTGTGCCACCGAGAAGAGTTGGTATATACGAGCCTCTCCATCAGTTTGGTATGTGGGGAGA
AACTTTCAAGAACAATATTGGCAATGGGGGAGACATGAACAGTCCTAGCCACATTATTATACCGAATTATCAACAAATAGAGAATA
ACAACTTGTCAGAGGATACTTCCCATGGAACAGGAGGAACTCCACACATGTTTGATCAAGAAGCTTCCACGTCCAGACATCCTGAT
AAGATACAGAGAAGGCTTGCACAAAACCGTGAGGCTGCTAAGAAAAGTCGCTTGCGGAAGAAGGCTTATGTTCAGCATCTAGAAAC
AAGCCGGTTAAAATTAATACATTTAGAGCAAGAACTGGACCGTGCTAGACAACAGGGTTTCTACGTTGGGAATGGCATAGATACTA
ACTCTATCGGTTTCTCAGACCCATGAATCCAGGGATTGCTACGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACU32463 TGA2 protein [Brassica rapa subsp. pekinensis]6911e-070
XP_002864946 predicted protein [Arabidopsis lyrata subsp. lyrata]6622e-067
NP_201324 transcription factor TGA1 [Arabidopsis thaliana]6613e-067
CAA48189 transcription factor [Arabidopsis thaliana]6613e-067
BAH20132 AT5G65210 [Arabidopsis thaliana]6613e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q39237 Transcription factor TGA16728e-070
Q39162 Transcription factor TGA45903e-060
P14232 TGACG-sequence-specific DNA-binding protein TGA-1A3026e-027
Q93ZE2 Transcription factor TGA72677e-023
Q39163 Transcription factor TGA52158e-017

TrEMBL top hits (Blast detail)Scoree value
B9DGG1 AT5G65210 protein6612e-067
B9DHB5 AT5G65210 protein6612e-067
Q24JJ3 At5g100305672e-056
B7U9T9 AT5G10030-like protein5402e-053
Q4ABR5 80A08_24937e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G65210.2 TGA1; DNA binding / calmodulin binding / transcription factor6727e-071
AT5G65210.1 TGA1; DNA binding / calmodulin binding / transcription factor6727e-071
AT5G65210.3 TGA1; DNA binding / calmodulin binding / transcription factor6727e-071
AT5G65210.4 TGA1; DNA binding / calmodulin binding / transcription factor6611e-069
AT5G65210.5 TGA1; DNA binding / calmodulin binding / transcription factor6611e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
121  50%

Unigene MembersMember information