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Information for unigene UN12509
| FASTA Sequence |
| Unigene ID: UN12509 | Length: 767 |
SSR | | GGAGGTGTGTATATGAAAAAAAAAGAAGGAGATTGTTGATGCGTTTCCAACGACGACGTGATCGTCCTCTCTCCTCCTCCTCATCT
ATTATTACAATTTCATCTCCTCTTTTCCCAGATTATCATCATTGTCTTTGTCTCTCTCTAGATTCTGGCTTCTCCTCGTATCAGAA
CCAAGATCCTCTGCTCTAATACCGACAATGGCAACGGGAAACAAAGGAAGACAACTGCCAAAATTTGGGGAATGGGACGCCGCGAC
TAATCCAGGCGCCGCCCAAGGATTCACCGTCATCTTCAACAACGCTCGCGACGACAAGAAGACCAAGAAAACAGCTGTTGCGGGAC
CTGAGAGTCTTGTTACACCTCCAACAAACAACGAGCCTCAACAGAACAACAACCGTCGTCATCATCGTCATCAACAGAACAACAAC
CATCGCAAGAAACGTAATTCGTCGCCACCCCCACGTGAAAAGAAGAAATGGCTTTGCTTCTATTGAATCTGGTTCGGGCTCTGTTT
TCAAAAAACGCAGTGGTAAGAAAGGAAGCAGATCGGTTCAGCAGAGTAGTTTTCAACAAATGACAACGACAAAAACCTTCTGTTCG
TGTTAGATTGTTGTTAACTTCAATTCTTCTTCTTCTTCCTCTTCTCGTCGAGTTTCTCTTTTCAACTTTGTTTTGGCCACACATTT
GGGTGTATTAATTAAATATACATTATTGTTCTTGCTGCTTCTTGGTTTGATTTTATAAAATGTTGACAATGTTCTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877610 hypothetical protein ARALYDRAFT_485205 [Arabidopsis lyrata subsp. lyrata] | 301 | 2e-025 |
| NP_566905 RPM1-interacting protein 4 (RIN4) [Arabidopsis thaliana] | 300 | 3e-025 |
| XP_002866545 predicted protein [Arabidopsis lyrata subsp. lyrata] | 210 | 7e-015 |
| NP_201132 RPM1-interacting protein 4 (RIN4) [Arabidopsis thaliana] | 207 | 2e-014 |
| XP_002322218 predicted protein [Populus trichocarpa] | 169 | 4e-010 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCF4 At3g48450 | 305 | 5e-026 |
| Q9FMJ6 Similarity to NOI protein | 207 | 1e-014 |
| B9IF41 Predicted protein | 169 | 3e-010 |
| B9I3K8 Predicted protein | 163 | 1e-009 |
| C6T2V0 Putative uncharacterized protein | 148 | 7e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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