Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN12534

FASTA Sequence
Unigene ID: UN12534Length: 966 SSR 
GGATCTCGCAGACAGAGAGACACTATTGTCTGAAGAAGAAAAAACGACAACGGGCAATTTCCATCCTCCGATCACTTCCTTCGGAA
GACATGCCAACTGGCGATTGCTTCCACTGCCACAAGCCAGGTCACTGGGCGAACCGTTGCCCTCTCAAATCCGCAACGAAGATCAC
CACCATCTACCCCGCAGCTTCTCCTCCGGTCATTCACTGCCACTGCGACCGAGCTTGCCTTGTTTTGACTTCTAAAACTCTGAAAA
ACCCTAACAGGAGATTCTACAAGTGCTCAGCAGTTAAGTCCCCTTCTCTCTTTCTCTCTCTCTCTTTAACTCTCTACTGATCCCTG
CCGACATTTTAGGTCCCAAACTGCGAATTTTTCAAATGGTGCGACGAAGTGAGTATCAATTCGCAACCTGTCTCCCTCAACCCTCC
TTGCCCTTGTGGCTCTGGTCCCTGTAGAAGAGTAACAGTCCCCGATGGACCAAACGCTAACCGTTCTTCCTTTGTTTGTTGCATTA
AGAAGGGTTTCGGAGCTTGTGGATTCTCTCAATGGGAGGATGATGCTCAAATTCAATCTGAACAAGTAGGACTTGGTGGTCCTCCT
TGTACTTCTACATTGTCTGATTTTTCGGAGTTTAAAAATTCACTTCCTAATACTGATTTGAGTTCGGATGCTAGTGTAAACCAAGA
ACCTAAAGATGTGGGTAGTTTTGAGACAGAAGAGAAAGTGCTCTCTTCACTTGCACCGGAACATAATGAAAATCAACTAAAGGATT
TGTGTTATTATTACACAACAAATAGTGATGATACGGGGTTTCGTGGTAAAGAGAGTTATGCACCTGAGTAGCTGAAGCAACGAGTC
TTTCTGAGACATCATCAATCAAGTTTCTATAGACAACCTGTCATCTACTACGTCTATGAACCGAGCCTCTTGCTCCTCTTTGATGG
ACCTCATTGAGCATATAACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894613 zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp. lyrata]2556e-020
NP_175890 GRF zinc finger / Zinc knuckle protein [Arabidopsis thaliana]2305e-017
XP_002873637 zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp. lyrata]2072e-014
NP_196896 endonuclease VIII-like 3 [Arabidopsis thaliana]2054e-014
ABR17577 unknown [Picea sitchensis]1841e-011

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FZ38 Putative uncharacterized protein F14C21.332303e-017
Q9FFY2 Emb|CAB86673.12053e-014
B8LPJ7 Putative uncharacterized protein1847e-012

Arabidopsis top hits (Blast detail)Scoree value
AT1G54930.1 zinc knuckle (CCHC-type) family protein2302e-019
AT5G13920.1 zinc knuckle (CCHC-type) family protein2052e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information