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Information for unigene UN12535
| FASTA Sequence |
| Unigene ID: UN12535 | Length: 1380 |
SSR | | GGATCTCGATCCAGATTCATTCGTGGAGGAAGACGAACGAACGAACCCTACTTTCATTGATCACGGTGGGAGAGAAGATCTGTGTA
AACAAATTTGGATTCCGTTTGTCGTAATCGCAGATCCCCCCGCTGCTTTCTCTCGATCGATATCGGTAACCTCCTCTGGTATTGAT
TTATCTAGCGAGGAAGGTGTGAAAAGAATCAGCATCCAGATTTATTGTTCTTGGTGTGTGCTATGAGTGCTGGTGTATAAGCAAAA
AAAAAAAATTAAGTTTTGGAGGGAACGTGAAAGGGAGAGCAAAGAGCAGGTCTTAGCTCCATTATGTGGCCAAGTTCGAGTCTTGG
TCGTTGGTGATTCAGGTGTTGGAAAAACATCACTTGTACACCTGATTAACAAAGGTTCTTCTATTCATCGCCCATCTCAAACGATT
GGATGCACTGTTGGTGTCAAGCATATAACTTACGGGAGTCCAGCTAGTTCTTCGAGTAGCATTCAAGGGGACGCAGAGAGAGATTT
CTTTGTTGAGCTCTGGGATGTTTCAGGGCATGAGAGATACAAAGATTGCCGCTCTCTCTTCTACTCACAAATCAATGGAGTTATGT
TTGTTCATGATCTCTCTCAGAGAAGAACAAAAACAAGCCTGCAGAAATGGGCGTCTGAGGTTGCAGCCACTGGAACTTTCTCAGCT
CCTCTTCCCTCTGGAGGTCCTGGTGGTCTTCCTGTTCCCTTCATCGTTGTTGGAAACAAAGCAGATATTGCTGCGAAAGAAGGTAC
AAAAGGAAGCAGTGGGAACCTTGTCGATGCAGCTCGTCACTGGGTTGAGAAGCAAGGTTTGCTTTCCTCAAGCGAAGAACTTCCTC
TCTTTGAAAGCTTTCCTGGTAATGGTGGTCTCATAGCGGCGGCTAAAGAAACCAGATACGATAAGGAAGCTTTCAACAAGTTTTTC
AGGATGTTGATAAGACGAAGATACTTTTCAGACGAACAACCAGCAGCTTCACCTTGGTCTATTTCGCCGCATCGAACCTCATCATC
CCAACGTTTAGACGACGAGATCACAAGCGACGATGACCAATTCTACAAGCGAACAAGTTTTCATGGAGATCCTTACAAGTACAACA
ACAACAACAACACGTTACCGCCACTTCCAGCACAACGCAACCTAACACCGCCTCCTACGCTCTATCCGCAGCAGCCGGTTTCTACT
CCTGATAACTACGCTATACCGAGATTCTCACTTTCTAGTGTACAAGAGACAAGCAACAATGGCAGTGGTAGATCTAAGCGAATGGA
TATTAACGTTTGAAATCATCTCTTTTATCGTTGCAAGAAAACTTAATGAAGCTCTGTGTTGCTTTTTGGTATCTATTATTCGTTTT
TTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568996 Ras-related small GTP-binding family protein [Arabidopsis thaliana] | 1652 | 1e-181 |
| XP_002864924 hypothetical protein ARALYDRAFT_496698 [Arabidopsis lyrata subsp. lyrata] | 1630 | 4e-179 |
| XP_002307133 predicted protein [Populus trichocarpa] | 1360 | 8e-148 |
| XP_002310606 predicted protein [Populus trichocarpa] | 1357 | 2e-147 |
| ACS66798 unknown [Dimocarpus longan] | 1352 | 7e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5J9 Uncharacterized GTP-binding protein At5g64813 | 1666 | 1e-184 |
| Q5HYI8 Rab-like protein 3 | 237 | 5e-019 |
| Q5ZKR4 Rab-like protein 3 | 230 | 4e-018 |
| Q6TNS7 Rab-like protein 3 | 230 | 4e-018 |
| Q9D4V7 Rab-like protein 3 | 229 | 5e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H5K6 Predicted protein | 1360 | 5e-148 |
| B9HG29 Predicted protein | 1357 | 1e-147 |
| C6K7X4 Putative uncharacterized protein | 1352 | 5e-147 |
| B9T5U9 GTP-binding protein yptv3, putative | 1349 | 1e-146 |
| A5AXG5 Putative uncharacterized protein | 1277 | 2e-138 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G64813.1 LIP1 (Light Insensitive Period1); GTPase | 1667 | 7e-186 |
| AT5G09910.1 ATP binding / GTP binding / transcription factor binding | 1303 | 1e-143 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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