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Information for unigene UN12540

FASTA Sequence
Unigene ID: UN12540Length: 745 SSR 
GGGTGAAGCAAAATAGAAAGCTGTTGTTGAATCGCCATGGAGGTTGAGAAATGGATCTGATTGTTTCTTTCTTTTTTTTTTTTCTC
TTTCTCGTGAGGAAAGAAAGAAAGAAAGAAAGAGAGAGAGATCTGGACCTGGACTAGGCGATGGGTACGGATTGGCGATCTACGAA
GGCGCGGTGGTGATCGCATCACTGTGTCTGTTAGGCTGGGCAGGTCTATGGTTCCTGAATCGGCGACTATACAAAGAATACGAAGA
GAAGCGAGCTTTGGTTCAGATCATTTTCAGCATCGTCTTCGCCTTCTCTTGTAACTTACTGCAGCTCGTCCTCTTCGAGATCATAC
CTGTGCTCTCTAGAGAGGCGAGGATGGTGAACTGGAAGGTGGATCTGTTTTGTTTGATACTGCTTCTCGTTTTCATGTTGCCCTAT
TACCATTGCTATTTGATGCTTCGTAATTCTGGTGTAAGAAGGGAGCGTGCCTCTGCTGCGGCTTTCTTGTTCTTGACAGCATTCCT
TTATGCTTTCTGGCGTATGGGAGTTCATTTTCCTATGCCTTCATCAGATAAAGGTTTTTTTACCATGCCTCAGCTGGTTAGTAGAA
TTGGGGTCATTGGTGTGCCCTTAATGGCTGTCTTATCAGGATTTGGAGCTGTAAATTTGCCCTACAGCTATATCTCTCTCTTCATT
AGGGAGATTGGGGAAGCAGATATAATATCTTTGGAAAGGCAGCTGATGCAGTCAACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888300 hypothetical protein ARALYDRAFT_475503 [Arabidopsis lyrata subsp. lyrata]9607e-102
NP_176679 GPCR-type G protein 1 [Arabidopsis thaliana]9572e-101
NP_194493 GPCR-type G protein 2 [Arabidopsis thaliana]9006e-095
CAB38275 putative protein [Arabidopsis thaliana]9006e-095
NP_001190854 GPCR-type G protein 2 [Arabidopsis thaliana]9006e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q9XIP7 GPCR-type G protein 19577e-103
Q0WQG8 GPCR-type G protein 29003e-096
Q5F448 Golgi pH regulator4551e-044
Q5BIM9 Golgi pH regulator4496e-044
Q8BS95 Golgi pH regulator4496e-044

TrEMBL top hits (Blast detail)Scoree value
B9I733 Predicted protein8996e-095
B9S266 Protein GPR89A, putative8898e-094
A2XX57 Putative uncharacterized protein8395e-088
A3AX31 Putative uncharacterized protein8395e-088
Q01HU0 B0403H10-OSIGBa0105A11.8 protein8395e-088

Arabidopsis top hits (Blast detail)Scoree value
AT1G64990.1 GTG1 (GPCR-TYPE G PROTEIN 1)9577e-104
AT1G64990.2 GTG1 (GPCR-TYPE G PROTEIN 1)9577e-104
AT4G27630.2 GTG2 (GPCR-TYPE G PROTEIN 2)9003e-097
AT4G27630.1 GTG2 (GPCR-TYPE G PROTEIN 2)2552e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information