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Information for unigene UN12561

FASTA Sequence
Unigene ID: UN12561Length: 1116  SNP
CCATTCAGATGCTGTTACAGGCCTTAGTGATGCTCTTATTGAAACGGTGCTTGAAATAGGATCTGTTGGGAAAGGTTTGAGTGGAG
GGATAAATACCTTCATTGCTCATAAAACTAGGGTTTCTTCTGCTACAACCATGACACTGGATGCTTTAAAGATAGCTCAGGGTTCA
TTTGCATCAAAGAATATCAAGATTCTTTCAGCTGATAAGACAAACCCTGGAATACCACCATCATCCATGATGGCATTCATGAAGAA
GAACCCTCAGACTTCAGCTGTTGTTCTTGAAGACTTTGATACCAAGTTTGTGAATAAGTTCTACCATAGTCACCTCGATGATTTGT
CAAATATCAACTCCTCGTCTGTAGTAGCAGCTGCTTCTGTTGTGGCCCGTACGCTTTACATCCTTGCAAGTGACAGCAAAGATTCA
AGCAATTCAGCTCTGGGATCTATCCATGTCAATGCTTCTTTTGTTGAAGAGCTTCTAGCCTGTCTTCTATCTTGTGAGCCGGGTTT
ATCATGCAACTTGGTCAAAGATTATATTTCACCGACGAACACTTGCCCAGGCAACTATGCTGGCGTCATCATTGGAGAACCTTCCT
CCAAACCTTACCTTGGTTCTGTCGGTGATGTTTCTAGATTCCTATGGAACATTTTGGCTGAGAAAACATCTGTGCAAAAGGGTAAC
ACAACCTCAAGTTGTTCAAAAGGAACCTGTAGCAAAACGGACGAGTTGTGCATCAAAGCAGAGAGTAACAAGGAGGGAACATGCGT
GGTCTCCACAACCAGGTATGTTCCAGCATATTCAACAAGGTTGAAGTATGCAGATGGCGCTTGGACTATTCTGCCCCAAAACACAT
CGGATGCTATGGGGATGGTTGATCCGGTCTGGACGGAGAGCAATTGGAACACTATAGGCGTGCAAGTGTACAGGGTCCAGCACTCA
GCATACGACAATGCAGTCCTTGTAGCGGGTATTACAGTCACAACATTGGCTTATATTGGAATTATGGTTGCCAAATCGTTCATCAC
AAAAGCTTTGAAGCAGGACTGAGACTTGATTGTAGCTCCCAAAATTTTACTTGTCAGTCCCACCCCCCACCATGTGACACCAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877876 hypothetical protein ARALYDRAFT_485634 [Arabidopsis lyrata subsp. lyrata]16303e-179
BAJ33923 unnamed protein product [Thellungiella halophila]16241e-178
NP_190832 nicastrin [Arabidopsis thaliana]16222e-178
CAB89225 putative protein [Arabidopsis thaliana]16222e-178
XP_002305230 predicted protein [Populus trichocarpa]11625e-125

Swiss-Prot top hits (Blast detail)Scoree value
Q8GUM5 Nicastrin16221e-179
Q54JT7 Nicastrin2097e-016

TrEMBL top hits (Blast detail)Scoree value
B9H3E1 Predicted protein11624e-125
Q3E6U9 Putative uncharacterized protein At3g52640.211168e-120
B8AI33 Putative uncharacterized protein9285e-098
Q6Z743 Os02g0736500 protein9285e-098
B9T119 Nicastrin, putative8641e-090

Arabidopsis top hits (Blast detail)Scoree value
AT3G52640.1 nicastrin-related16237e-181
AT3G52640.2 nicastrin-related11173e-122
AT3G52640.3 nicastrin-related7151e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  33%
 
111  17%
 
212  33%
 
121  17%

Unigene MembersMember information