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Information for unigene UN12599

FASTA Sequence
Unigene ID: UN12599Length: 1053 SSR 
GGGAGTGTGTGTGACACAACAAACTCTCTCTCTCTCTTTCTTCTCTCTCTTAAATGGGATTTGAATGGCGAATTATCTCCTCCTCC
TGATCCTTCTCCGATCACCAATCACCGGCCTTCACATCCTCCTCGTCTTTCTCCACTCCCTCTTATAAAAAAAATAAAAAGCCGAT
TCACATCTCTCTCTCTCTCAATGGCGTCGGTGTTCCTGTATCACGTGGTGGGAGATCTGACGGTGGGGAAGCCAGAGATGGTCGAG
TTCTACGACACCGAGACCGTCGAGTCCGCCATTCGCGCCATCGGAGAGTCCACCGAATGCGGGATCCCGGTCTGGAGGAAGAGATC
GGTTCTTCCTCCTCATCCTCATGGTGGGGTGGAGAACAGCGAGATGAGGCAGCAGAGGTTCGTTGGGATTCTGAGTTCTCTGGATA
TCGTTGCGTTCTTAGCTAAGAGCGAGTGTCTTGAAGAAGATAAAGCGATGAAGATCCCTGTCTCTCAAGTCGTTTCCCCTAACAAC
TCTTTCCTCAAACAAGTTGATCCTGCCACCAGGTTGATAGATGCTTTGGAGATGATGAAACAAGGAGTGCGACGACTTCTAGTTCC
GAAAAGCGTTGTTTGGAGAGGTATGAGCAAGAGATTCTCCATTCTTTACAATGGAAAATGGCTGAAGAACAGCGAAAACTCTAGCA
GTAGCAGCGGTCTCTCCGCTGACTCCAACAGGCCTGCTACTTCCAAGGCTTCAAGCCGGGACAAGTTTTGCTGTCTCTCAAGGGAA
GACGTGATCCGCTTCCTCATAGGTGTCCTTGGAGCATTAGCTCCTTTGCCACTCACATCAATCTCTTCTCTTGGAATCATCAATGT
AGACTACAACTTCATTGAAGCCTCTTTGCCAGCCATCGAAGCCACCAAAAGGCCACCGTGCGATCCTAGTGCGATCGCCGTATTGG
AACAAACCGAGAACGAAAAACAGTTCAAGATAATAGGAGAAATCTCAGCTTCGAAGCTCTGGAAATGTGATTATCTCGCTGCAGCT
TGGGCGCTAGCTAATCTATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888360 hypothetical protein ARALYDRAFT_475589 [Arabidopsis lyrata subsp. lyrata]13032e-141
NP_176711 CBS domain-containing protein [Arabidopsis thaliana]12996e-141
XP_002325465 predicted protein [Populus trichocarpa]10829e-116
XP_002329005 predicted protein [Populus trichocarpa]10514e-112
XP_002279210 PREDICTED: hypothetical protein [Vitis vinifera]10182e-108

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GZA4 Putative uncharacterized protein At1g65320/T8F5_1012994e-141
B9IQ10 Predicted protein10862e-116
B9N159 Predicted protein10566e-113
O80804 T8F5.107833e-081
A2WYF5 Putative uncharacterized protein6419e-065

Arabidopsis top hits (Blast detail)Scoree value
AT1G65320.1 CBS domain-containing protein12992e-143
AT5G53750.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT4G27460.1); Has 79 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1479e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
91  50%

Unigene MembersMember information