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Information for unigene UN12631

FASTA Sequence
Unigene ID: UN12631Length: 910  SNP
GGGCATTGAAAAAACAAGAGTACACAAAAATGGTAGAAAAGGTTTGGTCTTTGCTTAAGCTTTTAATGTTCCAAGGTCTTTTCACT
TCACCTCCTCAAGATCCAGGCTTTGATTTTTTCTACCTTGCTCTTCAGTGGCCAGGTGCCTATTGTGATACAAAGCGTGCTTGTTG
CTATCCAACAACAGGTAAACCTGAGGCAGATTTTGGCATCCACGGTTTGTGGCCTAATTACAACAACGGTTCGTATCCATCAAACT
GCGATCCCAGCAATGAATTTGATCCATCTGAGATATCGGATCTGGTAAGTACTTTGCAAACGAAGTGGCCAACGCTATCTTGTCCG
AGCAACGAAGGTTACAAGTTTTGGGAACACGAGTGGGAAAAACATGGTACGTGTTCCGAATCCGTAATGGACCAACATGGCTACTT
TGAGCAAACTCTTGCACTCAGAGAAAGAATCAATCTTCTTCAAATCCTCACAGACGCAGGAATCGAACCAAATGACGAATTCTATA
AACTTGAAGACATTAAAAACGCGATAGAAAAAGGGTTTGGGTTTACCCCAGTAATCAATTGTAACAAAGATCCGGAGAAAAACCGT
CAACTTCACGAGATCTTGTTTTGCGTCGATAAATCAGGAACTGAGTTTATGGACTGTCCAATGCCTACAGATAGATGTCCTTATTC
TAATATCCAGTTTGCTAAGTTTTAATTATATCTTTCTTTTGAGTGAACTTTTATAATTAAACTTTAAATTTCATGTGGAATCTAAA
ATGTAATATCTTACACGTTACTTTCAATTTATTAAAATATAATAAGACAAGCTTTGGTGTGATAGGGGCATGCATGTCTATCAATT
ACGGTGTATTATTATTACTTTTTATTAATCTGAAGTTATCTAAAACTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892796 ribonuclease T2 family protein [Arabidopsis lyrata subsp. lyrata]9303e-098
NP_563941 ribonuclease T2 [Arabidopsis thaliana]8928e-094
BAF03592 S-like RNase [Fagopyrum esculentum]7592e-078
BAF03591 S-like RNase [Fagopyrum esculentum]7592e-078
BAF03593 S-like RNase [Fagopyrum homotropicum]7583e-078

Swiss-Prot top hits (Blast detail)Scoree value
P42815 Ribonuclease 37302e-076
P42813 Ribonuclease 16934e-072
P80022 Extracellular ribonuclease LE6764e-070
P80196 Intracellular ribonuclease LX6568e-068
P42814 Ribonuclease 23512e-032

TrEMBL top hits (Blast detail)Scoree value
Q9XI64 F7A19.32 protein8925e-094
Q0KKW3 S-like RNase7591e-078
Q0KKW4 S-like RNase7591e-078
Q0KKW2 S-like RNase7582e-078
B9S8X4 Ribonuclease t2, putative7421e-076

Arabidopsis top hits (Blast detail)Scoree value
AT1G14220.1 ribonuclease T2 family protein8932e-096
AT1G26820.1 RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T27311e-077
AT2G02990.1 RNS1 (RIBONUCLEASE 1); endoribonuclease/ ribonuclease6943e-073
AT1G14210.1 ribonuclease T2 family protein5922e-061
AT2G39780.1 RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T23512e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  20%
 
62  20%
 
121  10%
 
115  50%

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