 |
Information for unigene UN12641
| FASTA Sequence |
| Unigene ID: UN12641 | Length: 1382 |
SSR | | GAATCCATCACTGATTCATCTCTTCTCAACCTCCTCCTCCGCATCTCCTCAAGACGGGAACGAATCTGGCGAACAACCGTCTTCGG
ATTTGAAAATATCATCCTACTTCAGTGGTATCAAAAGCAGCTTGAAACAGCAACCCCAACAGCACCAGCCTCAGGACGGTAGGAGA
CAGTTCGCCGGACTCGATTCCAAAGCTCCGTCCGGCGGAGATTTTCAGGATGTCAGGAGGAATCTGAACGAGTTCCGACGAAGATC
AGTAGCTCCTCCGGCGAGGGATTTACAGGATCTGTACAAGCAGAACGTGGCATCAAAGCAGCCGCCCGGAGATTTCCAAGGCTCGA
CTTTTGGAAACCTAAGGCAAAACTTGAGGCAGATGAGACCGCATCAAGAGACCACCAGATGGTCTAATCTATCAAGCCTTCAGAGC
ATCATGAAGACTAAAAACAATGTCCGTTCAAACGTGTTTGAGGGATTGCCCATTTCAGTGTTTGGTGAGGAATTAGAAGAAAGGAA
GAAGATGGGAGATGATGATGATGATTCAGAGGAGATGAAATCGGAGTTTATCAAGAGCTGCAACACTAAAGAACTCGGGGATATAC
TCAGACAGTACAGACCTGAGGAGGGTAAGAGAGAACATGGTTGGTTCTCGTTGCAGGAGCTCAACCAGAGGCTTGTTAAGTTGAGA
CAAGTGGAAGAGGCATCAGCCCTGGGTACCAGGAAGGGGACTGCCTTCGATGATCTCAGGTCTGAGATTCAACTTGCCAGAAAATC
ACAAGCCTTTCAGAACTTGGATTTCTTCAGCGTTTTAAATGGTACCCCAAAGTATTTGCTCGAGCCTCCGAAAGATGAGCTAGTTC
AAACTTATTTCCACCCGGATAACATGTCATCTGCGGAGAAGATGAAAATCGAGCTTGCAAAGGTCAGGGAAGAGTTCAAGATGTCT
GAATCCGATTGTGGTTCTGCACGTGTTCAAGTGGCACAACTGACTACTAAAATCAAGCATTTATCCTCTGTTCTACATAAAAAGGA
TAAGCATTCGAGAAAGGGACTTATAGCAATGGTGCATAGACGGAAGAAACTGCTCAAGTATATGAGAAGAACCGACTGGGACTCTT
ACTGCCTTTCACTGTCAAAGCTCGGACTTCGTGACAACCCAGATTACAAGTTTTAAACTTCTTTATGCAAGGGACATAATGAATCG
TGACCCCACAGTAAACACTCTTTTTGTTCTCTTCATTTTGTCAAAAGAGATGATGTGGGTCTCTTGTATCCATCATTTTGGCGAGG
AAAGTTGTTTTACTACAGTTAATGTTGCAGGCTGTTTAGGCAAAGAGTCTGACATTGTGAGAAGTTTGATAATAAAGTACAATTTT
GATAAC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_849914 S15/NS1, RNA-binding protein [Arabidopsis thaliana] | 1240 | 6e-134 |
| XP_002889283 ribosomal protein S15 family protein [Arabidopsis lyrata subsp. lyrata] | 864 | 3e-090 |
| NP_563982 S15/NS1, RNA-binding protein [Arabidopsis thaliana] | 810 | 5e-084 |
| XP_002890125 ribosomal protein S15 family protein [Arabidopsis lyrata subsp. lyrata] | 807 | 1e-083 |
| XP_002264817 PREDICTED: hypothetical protein [Vitis vinifera] | 715 | 5e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7VKX3 30S ribosomal protein S15 | 191 | 1e-013 |
| A3N113 30S ribosomal protein S15 | 188 | 3e-013 |
| B3H1N7 30S ribosomal protein S15 | 188 | 3e-013 |
| B0BPU4 30S ribosomal protein S15 | 188 | 3e-013 |
| B8F5Z2 30S ribosomal protein S15 | 188 | 3e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M8M9 Putative uncharacterized protein T21F11.5 | 1256 | 6e-136 |
| Q9LMQ3 At1g15810/F7H2_23 | 810 | 3e-084 |
| B9H0A4 Predicted protein | 678 | 7e-069 |
| B9SWS4 Structural constituent of ribosome, putative | 634 | 8e-064 |
| B8AEE3 Putative uncharacterized protein | 586 | 3e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
