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Information for unigene UN12659
| FASTA Sequence |
| Unigene ID: UN12659 | Length: 834 |
SSR | | AACAAAACGAGATTATGATCTAAAAAGGCTGTAAAAGGTTACTCACTCTTACTAGTCTGTGTTGTATACCACCGATTATCATTCTT
TCGGAACGCAAGAGTTAAAAATTACCAAACACAAACGTAATAAATAAAACAATTGTGGCTTACTTGTCATCAAAATGAGGACATGT
TCACTCTCTACTCATGTTTAAAAAACTGGATGCCTCTCTCTCTCTCTATTTCTGTTCCATCTTTGCTCTGATCTTCTCCTCGAGTA
ACTCTAGTTCGAGTTCAAACATTCTGTTGAGAGCCTCCATGTTCTCCAGCGTCTCATGGAGCGGTCTGTTCTCAGTGTCATCGCAT
CTCAAGTGTTTCATTGGACCGTGCAGGATCTTGTTCACCATACCTCGGGTTAGATCCTCTACTGATTCCTTCGTCTTCTTGTCCAT
GTCTTTGCCATATTTCGACATGAACTTTTCAACCGAAACAGCTCTGATTCTATCTATTTTTCTTCTTAGTTTCTTGATTGTTGGAA
CCGTCTGCAAAGAGTCCCTCCACGCTTCAAACTTTCTACTTTCCTCTCTTATTATATCCTGAGCTTCCATTGCTTTCCTCGCCCTG
TCTTCTTTGTTGGCAGCAACAACTTCTTTGAGGTCATCCACGTTGTAAACCCGTGTACCCTCTATTTCAGCAACACAAGATCCAAC
GTTTCTAGGAACAGAGATATCAACAAAGAGCCTCGGAGCACCCGTAAGAGGGAGAGACTCAACGTGCTCCTTCAAGAACAATGGTG
TCTCAGATGCTGTGCTGGTAAAGATTACACTGGCTTCTGCAGCACAAGCTAGCATCTCAT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAB01674 glutamyl-tRNA reductase [Arabidopsis thaliana] | 752 | 1e-077 |
| NP_172465 glutamyl-tRNA reductase 2 [Arabidopsis thaliana] | 749 | 3e-077 |
| BAF00558 putative glutamyl-tRNA reductase 2 precursor [Arabidopsis thaliana] | 749 | 3e-077 |
| XP_002892538 glutamyl-tRNA reductase [Arabidopsis lyrata subsp. lyrata] | 737 | 6e-076 |
| XP_002888255 hypothetical protein ARALYDRAFT_475445 [Arabidopsis lyrata subsp. lyrata] | 733 | 2e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49294 Glutamyl-tRNA reductase 2, chloroplastic | 749 | 1e-078 |
| P42804 Glutamyl-tRNA reductase 1, chloroplastic | 716 | 8e-075 |
| P93111 Glutamyl-tRNA reductase 1, chloroplastic | 690 | 8e-072 |
| A2Z928 Glutamyl-tRNA reductase, chloroplastic | 659 | 3e-068 |
| P0C587 Glutamyl-tRNA reductase, chloroplastic | 659 | 3e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5BZY3 Glutamyl-tRNA reductase | 730 | 3e-075 |
| A6Q0F0 Glutamyl-tRNA reductase (Fragment) | 716 | 1e-073 |
| B9GN57 Glutamyl-tRNA reductase | 710 | 6e-073 |
| B9R6Q2 Glutamyl-tRNA reductase | 710 | 6e-073 |
| Q0WWL6 Glutamyl-tRNA reductase | 709 | 8e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09940.1 HEMA2; glutamyl-tRNA reductase | 750 | 8e-080 |
| AT1G58290.1 HEMA1; glutamyl-tRNA reductase | 734 | 6e-078 |
| AT2G31250.1 HEMA3; NADP or NADPH binding / binding / catalytic/ glutamyl-tRNA reductase/ shikimate 5-dehydrogenase | 708 | 6e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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