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Information for unigene UN12664
FASTA Sequence |
Unigene ID: UN12664 | Length: 808 |
| SNP | GGGACCAAAGAAGTTCAAAACAAAAACAAAAGAAGTGTTGAAAAAAAAAACAAAAAAAAAACAATAAGAAGAAGAACAAGAATGTC
GTTTTCTGGATATAGCTTCGTCGTAGTAACATTACTCTCCGTCGTCTTAACTCAAATCTATGGTTCCTGTAATGACCCACAGGCTG
AACCCCAACCGGCAGCAATGTCAGGGCATAATGCTCATCCCCAACCGGCAGCAACGTCAGGGCTTAATGCTCATTTTCAACCGGCA
GCAAGGTCAGGGCTTAAGGCTCATCCCCAACCGGCAGCAACCTTAGGGCTTAACACCCTAGGTCGAACCAACTTAGACCCAATGTT
TGATCTCAACCCGGCAGCAACTTTATTGGTTCACAATCAGGTTCGAGCCGAAGTCGGGGTGGCTCCAATGCTGTGGGACTTTAAAC
TAGCTGCCTTCGCACAGAACTACGCTAACGTACGATCCAAAGACTGTGCCCTACAGCATTCGAACGACGAAATGTACGGCGAGAAT
ATAGCTGCAGGGTGGCTCAAATCTAAGGAATCAATGAGCGGTCCGATCGCGGCTAAGTTGTGGTATGGCGAGAAGAAATTCTACAA
TTATCAAACCAACAAATGTAGTGGTGTGTGCGGGCATTATACTCAGATGGTGGCTAACCAATCGCACCGAGTTGGTTGTGGTCACG
TCAGTGTCATGCAAATACATATCTTTGGGTCGTATGTAACTATGCTCCTAGGCCGATGGGTGATGAGACACACGTCCGTATTAATG
AACTTTTGTTTTACTAAGACGAGTAGTTGTCTGA
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GenBank top hits (Blast detail) | Score | e value |
AEK67309 putative allergen V5/Tpx-1-like protein [Lepidium sativum] | 411 | 4e-038 |
XP_002883961 hypothetical protein ARALYDRAFT_480476 [Arabidopsis lyrata subsp. lyrata] | 363 | 1e-032 |
NP_179587 putative pathogenesis-related protein [Arabidopsis thaliana] | 360 | 3e-032 |
XP_002883957 hypothetical protein ARALYDRAFT_480473 [Arabidopsis lyrata subsp. lyrata] | 340 | 6e-030 |
NP_179588 allergen V5/Tpx-1-related family protein [Arabidopsis thaliana] | 335 | 2e-029 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P11670 Basic form of pathogenesis-related protein 1 | 273 | 2e-023 |
Q04108 Pathogenesis-related leaf protein 4 | 263 | 2e-022 |
P33154 Pathogenesis-related protein 1 | 260 | 6e-022 |
Q08697 Pathogenesis-related protein 1A1 | 257 | 1e-021 |
P08299 Pathogenesis-related protein 1A | 253 | 4e-021 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9SL83 At2g19970 | 360 | 2e-032 |
Q9SL82 Putative pathogenesis-related protein | 335 | 2e-029 |
Q9ZNS4 Putative pathogenesis related-1 (PR1) protein | 283 | 2e-023 |
Q04106 Prb-1b | 281 | 3e-023 |
Q0KIX9 Pathogenesis related protein 1 | 281 | 3e-023 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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