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Information for unigene UN12672
| FASTA Sequence |
| Unigene ID: UN12672 | Length: 1898 |
SSR | | TCAAATTTGGACTTTGATTCATCTTTGCTAATAACAAAAAAATAAAAATAAACTCAACTATTGCAGTCTAGAAATATTTAAAATGG
TCTCGTAGGTCTGAAATGAAGTGCTGTTGCATAATAATAACATCACAAAAAGACGAAGACACCAGGGAAGAGTAAGATCGAAGACT
TTGCGGGCATTGGCATAATTGATTCCCTCCTCCATGTGTTTCATGAAAAGAGCTGATGAAAGCTTAAGCAGCTACATTTGTCAAAT
CTTTCACTGGGACAATTTCATGAGGCTCTGCTAATTCCTCTTCATGCTTGGGGATGAAAGCTGTATCAACTTTTCCGTTTTTGAAA
TCCTCAACTTCAAGGATAAGCTTGTGGTACTCAATGGTGGTGGGAACCCCTGTAATAATAGTGTCATTAAGTGCACGCTTCATCCG
CTCGATTGCCCTTTCCCTCGTTGGAGCCCATACAATAAGCTTTCCAAGAAGAGAATCATAGCTTGGGGGAACAACATAGTCGGGAT
ATACATGGCTATCCATCCTAACAAAAGGACCTCCAGATGGCAGATACGATGTGTCTTCCAGGTCCAGGTCTGAATCCTTTAAATGG
GTCTCTGCATTGATACGACATTCAATCGAGTGTCCTCTAAGCACAATCTCATCCTGTGTATAACGCAGTTTCTCTCCCATTGCAAC
ACGAATCTGTTCTTCAATCAAATCAACCGAGTAAATCATCTCCGTCACAGGGTGCTCCACCTGGATTCTAGTGTTCATTTCCATGA
AATAGAAGGAACCTCTCTCATCCAAAAGAAATTCCACCGTACCAACACCAATGTAACCAATGGACGCTGCTGCTGCCACTGCTGCA
TCTCCCATGGCTTTTCGCAGCTCAGGGGTCAGTGCAGGAGAAGGCGCTTCTTCCAGCAATTTTTGGTTACGTCTCTGAATGCTGCA
GTCACGCTCGCCAAAGTGAACAACATTACCAAATTTATCTGCAAGGATCTGGAACTCGATATGCCGGGGATTTTGCACGTACTTCT
CCAGATAAACTCCATCATTTCCAAAAGCCGCGGCGGCCTCACTCTTTGCTTGCTGCAACAGTTTCACAAACTCTGAGGGTTCGTTA
GCAAGACGCATTCCACGTCCACCACCACCTGCTGTTGCCTTGATCATTACAGGGTACCCAATCTCATTGGCGAGCCTGACTCCTTC
TTCTGTGCTCTGCAATAGTCCATCACTCCCTGGAACAGTTGGGACACCTGCATTTTTCATTGTCTCCCTGGCAGTTGATTTGTCAC
CCATGACACGGATACTATCAGGATTTGGTCCAATAAAATTGATCCTGTGTTCTCTGCACATCTCAACAAAAAGAGCGTTCTCAGCA
AGGAACCCATATCCAGGATGGAGCATTGTACATCCTCTGCTAATCGCAGCTGACAGAACATTCGGTATCAACAAATACGACTGGTT
GCTAGGAGCTTCACCAATACAAACAGCTTCGTCAGCCAACTTCACATGGAGTGCATCCTTGTCTATGGTTGAGTAGACAGCAACAC
AAGGGATCCCCATTTCGTGAGCAGTTCGGATAACACGGACAGCAATTTCACCTCTGTTAGCCACAAGAATCTTATCCCCACTGCTG
CAAGTAGCAGCAAGCGCACCACCACCACCACTCCTCCTCTTCACGTTCCGGCTAACCTTCAAAGTCAGGGTCTTTTGCCTCGGGAA
GCTAACCGTTTGTCCCATCGTGACATTACACTGGGAACTTCTAGTGCAACCTCCCGACCTCCCCAGGAACAAAGAGGGAAGGGAGG
CGACGGATTTGCACTTAGTAATCATTGAGGCGTCCATTGCTGGATAAGAGTAGCAGATCCTCAGAGAGGAGAAAGATTTCGATGTA
AACTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADI79335 chloroplast biotin carboxylase [Brassica napus] | 2593 | 1e-290 |
| ADI79330 chloroplast biotin carboxylase [Brassica oleracea] | 2589 | 4e-290 |
| ADI79333 chloroplast biotin carboxylase [Brassica napus] | 2568 | 1e-287 |
| ADI79334 chloroplast biotin carboxylase [Brassica napus] | 2518 | 6e-282 |
| ADI79336 chloroplast biotin carboxylase [Brassica rapa] | 2514 | 2e-281 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04983 Biotin carboxylase, chloroplastic | 2344 | 4e-263 |
| B9HBA8 Biotin carboxylase 1, chloroplastic | 2274 | 5e-255 |
| B9N843 Biotin carboxylase 2, chloroplastic | 2210 | 1e-247 |
| Q06862 Biotin carboxylase | 1549 | 6e-171 |
| P49787 Biotin carboxylase 1 | 1297 | 1e-141 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93Y50 Biotin carboxylase | 2495 | 2e-279 |
| C5IU91 Biotin carboxylase | 2242 | 4e-250 |
| B5LAS7 Putative acetyl co-enzyme A carboxylase biotin carboxylase subunit | 2238 | 1e-249 |
| C5ILA9 Heteromeric acetyl-CoA biotin carboxylase | 2234 | 4e-249 |
| A5HJL1 Chloroplast biotin carboxylase | 2229 | 1e-248 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G35360.1 CAC2; acetyl-CoA carboxylase/ biotin carboxylase | 2345 | 3e-264 |
| AT5G35360.2 CAC2; acetyl-CoA carboxylase/ biotin carboxylase | 2126 | 6e-239 |
| AT1G03090.2 MCCA; methylcrotonoyl-CoA carboxylase | 1023 | 5e-111 |
| AT1G03090.1 MCCA; methylcrotonoyl-CoA carboxylase | 638 | 2e-066 |
| AT1G36160.1 ACC1 (ACETYL-COENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase | 382 | 1e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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