 |
Information for unigene UN12686
| FASTA Sequence |
| Unigene ID: UN12686 | Length: 951 |
| SNP | TGGCTTTCTAAAATTATTTATTGAGTAATTTTAGTAGAAAGGTACAAGAGTCCATATCTTAAGTGCGGACATGCACTAATCATATT
GATAAACACACAGAAAATCACAAAGTTTTTCTTTCTAATGTCATCAAATCATCTCGTAGTTACTAACCAACATTATAAGAAAGGAT
AAATGAGAGTTAATTAAAGAGCTCCATTATTCATCTTCAGAGGCCTCTCCATGCTCCATGCATCGAGACTCTCTACGTTCACAGTT
TGTGTTCCATTGTTAAACACATACAAATGCGCATTCTCTTTCACTGCTTTCACTGGATACACTCTTGACGTTATGACTGTCTTCCC
CAATGCTCCGAAGCTCTCTACTACCGAGTGATCAATCAAACTCCTTAAAGAGATCCTTCCATCAGATAGATCAACATCCACAAAAC
CAGCAAATGATGGTTTGTACATCCTATCTTGTTTGAGTGGACCCCTGTCTTGCTTCAACGATGAAGGTCTAGCATCGGAGCACATG
AGAACCTTAGGCTTATATGTAGAGGTGTCTTTGAAGACTCTAAAGAAGACAGGAGTGTACTCTTCCAAATCAGGAGTGGCCAATGT
GATCAGACCAAAAGGTCCAACACCACCTGTCACATTCGAGCCTTTTATTTTACACAAATCAAACGGTTTGAATGTGAAGCTCGGGT
CGAATGCCTCAGCTTTCTCTAGACATTGTCCCACGTTGAATGTCACTTCCACATCGGCCTGAGCAGGAGTGATTCCTTCAACTTCT
AAGCGTTGACCCATCGTTATGTTTTTGTTGTTCATTCGGACGTAGTTACTTCTTAGTGACTCTATTTCTTCAATAGGCCAAAACAC
TAGTTGCTTCTTGTTTGCGTCAAGAAGCACCGTTCTTGGAATAACCTGAAGACCGGCCCATCCCTTTGAGATATCATCTTCAAGGG
TGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881429 ATCWINV4 [Arabidopsis lyrata subsp. lyrata] | 1160 | 7e-125 |
| NP_565837 beta-fructofuranosidase [Arabidopsis thaliana] | 1135 | 6e-122 |
| AAM61359 putative beta-fructofuranosidase (invertase) [Arabidopsis thaliana] | 1135 | 6e-122 |
| XP_002877875 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1010 | 2e-107 |
| BAC42957 putative beta-fructofuranosidase [Arabidopsis thaliana] | 988 | 6e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W413 Beta-fructofuranosidase, insoluble isoenzyme CWINV4 | 1135 | 2e-123 |
| Q1PEF8 Beta-fructofuranosidase, insoluble isoenzyme CWINV2 | 988 | 3e-106 |
| P26792 Beta-fructofuranosidase, insoluble isoenzyme 1 | 734 | 8e-077 |
| Q39692 Beta-fructofuranosidase, insoluble isoenzyme 2 | 707 | 1e-073 |
| P49174 Beta-fructofuranosidase, cell wall isozyme | 648 | 7e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B6EUC9 Putative uncharacterized protein At3g52600.2 | 988 | 4e-105 |
| Q43172 Beta-fructofuranosidase (Fragment) | 759 | 2e-078 |
| Q8LRN6 Cell-wall invertase (Fragment) | 759 | 2e-078 |
| Q8LRN9 Cell-wall invertase | 759 | 2e-078 |
| D5LY30 Cell-wall invertase | 749 | 2e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G36190.1 AtcwINV4 (Arabidopsis thaliana cell wall invertase 4); hydrolase, hydrolyzing O-glycosyl compounds | 1136 | 2e-124 |
| AT3G52600.1 AtcwINV2 (Arabidopsis thaliana cell wall invertase 2); hydrolase, hydrolyzing O-glycosyl compounds | 988 | 2e-107 |
| AT3G52600.2 AtcwINV2 (Arabidopsis thaliana cell wall invertase 2); hydrolase, hydrolyzing O-glycosyl compounds | 988 | 2e-107 |
| AT1G55120.1 ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5); hydrolase, hydrolyzing O-glycosyl compounds / levanase | 573 | 3e-059 |
| AT1G55120.2 ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5); hydrolase, hydrolyzing O-glycosyl compounds / levanase | 573 | 3e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
