 |
Information for unigene UN12736
| FASTA Sequence |
| Unigene ID: UN12736 | Length: 860 |
SSR | | GGATGACGAACTCAAACGGAGACGGCGACAATCTTCGAAACCCTAATCAGAGATCAAAGGGTTGCGAAACCTTCCAGGTTTCTATG
TAAAGTTTTAACCTTTTTGGCTTTCTCTCTCTCTCTCTGTTTGAATCTGTAAACGGAGAAAACTAGAGACTGAACAAAGAGTGTTT
TTTTTCCCTTCTTCTCCGAATCTGCAATGATGGGCTCTCTATACATTGCATGTGTTGAAAATCTCCGATCTTTGATACTAGAAGCC
GTTTCGTAGTTAGGTTAATCTGTGAAAGAAACGTAGAAGAAGTAGAAAGAGGCTCACCATTTGAATGCAAAGAAGCTTTGATTTGA
TTCTGCAGCTATGGAAGGGAACTACACTGATAAGACAAGAGTGTTGGACATCAAACCCATTGCGTACTCTAAGACCTGTCTTCCCC
AGCGGAAACCAAGCTCCCCCTTTTGTCTGCGCACCTCCTTTTGGTCCCTTTCCATCTGGATTCTCACCTCTCTATCCCTTTACCTC
GTCTCAAGTGAACGAACAAACACCAGATCTCTCTCAAGCTCAAAACCCACCTCAACATCAGCCTCAGGTTCCACCTCAAACTCAAC
ATCAGCCTCTTGTTCCACTTCAACAGCAGCCTTTGTTGGTTACTTCTTTGAGACCATTTAGATCTTTTGATACAACGTTTAATGGA
GACATAGAACCCGAGGGGTCAACTTTGAAAAGAAAGTTCCCTAAAAAGCGTCAGCTTGCTAACTTCGAGAGTGGGTTCAGCGTGGT
TCATTTGGTTGATGGTAAAAACGTGAAAAAGGGTATAGTGTTCTTTTAAGCCTTTTCTTCAACGGCATAAGACGCAAGTTGTGATG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196113 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Arabidopsis thaliana] | 410 | 5e-038 |
| XP_002873176 hypothetical protein ARALYDRAFT_487281 [Arabidopsis lyrata subsp. lyrata] | 375 | 6e-034 |
| XP_002273935 PREDICTED: hypothetical protein [Vitis vinifera] | 195 | 5e-013 |
| CBI29164 unnamed protein product [Vitis vinifera] | 195 | 5e-013 |
| XP_002887472 hypothetical protein ARALYDRAFT_895166 [Arabidopsis lyrata subsp. lyrata] | 195 | 5e-013 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FF80 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 | 410 | 2e-039 |
| Q9C5P4 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 | 187 | 2e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SVN4 Putative uncharacterized protein At5g04940 (Fragment) | 410 | 4e-038 |
| B9SHW2 Histone-lysine n-methyltransferase, suvh, putative | 188 | 2e-012 |
| B9GXL1 SET domain protein | 184 | 6e-012 |
| B9IQN1 SET domain protein | 152 | 3e-008 |
| B9P5N0 SET domain protein | 152 | 3e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G04940.1 SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase | 410 | 2e-040 |
| AT5G04940.2 SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase | 410 | 2e-040 |
| AT1G73100.1 SUVH3 (SU(VAR)3-9 HOMOLOG 3); histone methyltransferase | 187 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
