RadishBase

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Information for unigene UN12748

FASTA Sequence

Unigene ID: UN12748	Length: 896	SSR
GGATTATCGTCTCTCTCTCTCTCTCTCTCTCTCTCGAGGCAGAAACTGAAGAAACAGTTTCTCTCTCTCCTCCCTTTGCGTTAACA ACAACACCTAAGCCTGAACTCTGAAGGGCAATCCAAGTAGCCTTCCCTTGATCACATGGCTTCCTTTGACGGACCAAAGTTCAAGA TGACCGATGGCACTTACGTCCAGACAAAATCCATCGATGTCGGATCATCGACAGACATCTCACCACACCTCTCCCTCATAAGAGAA GACTCCATCTCGAACTCAAACAGAGCAGTAATCTTCGACGTTAACTGGGAGACATCTACCAAAGCATCAAAGTGGAGTCTCTCCTC AGTGAAGCTCAGCACTCGAAGCCTCTGCCTCTTCCTCAAACTCCCCAACCCTCCTTTCCACGGCGACAACCTCGACGATCTCCGCC GTTTCTTCGCTTCCAAGTTCGTGACCTTCGTCGGTGTCCAGATCGAGGAGGACCTGAACTTGCTCAGAGAGAACCACGGTCTTGTA ATAAGAAACGTGATCGAGGTGGGGAAGCTAGCTGCGGTGGCTCGTGGGACTCTGCTGCTCGAGTATCTTGGGACTAGAGAGTTGGC TCACAGAGTGTTGTGGTCTGATTTGAGCAGGCTTGATTCGATCGAGTCTAAATGGGAGGAGAAAGGTTCTGAAGAACGTCTCGAGG CTGCGGCTATTGAAGGTTGGCTTATCTTCAATGTTTGGGATCAGTTATCCCAGTGAGATTCTACTACTTTGATTTGTGTCTTTGTG ATCTTTGTGATCTTGTGTATGTTTTGTTTGGTATGAATAAAACGAACGTTGCATCATTTACTAACATCTAGAATGCAAACATCAAT GTTCTATTGTTATTTTTAGATTATACAATAAAAAAA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_196263 DnaQ-like exonuclease domain-containing protein [Arabidopsis thaliana]	828	2e-086
XP_002873257 hypothetical protein ARALYDRAFT_487454 [Arabidopsis lyrata subsp. lyrata]	821	1e-085
1VK0 Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At5g06450	817	4e-085
XP_002884864 hypothetical protein ARALYDRAFT_897381 [Arabidopsis lyrata subsp. lyrata]	710	1e-072
NP_187783 DnaQ-like 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]	695	5e-071

Swiss-Prot top hits (Blast detail)	Score	e value
Q9FNG3 Uncharacterized protein At5g06450	828	9e-088

TrEMBL top hits (Blast detail)	Score	e value
Q9SF21 At3g11770	695	4e-071
B9S7N5 Glycogenin, putative	155	1e-008
B9IPD0 Predicted protein	148	1e-007
B9IPD1 Predicted protein	145	2e-007
A2WTG1 Putative uncharacterized protein	137	2e-006

Arabidopsis top hits (Blast detail)	Score	e value
AT5G06450.1 nucleic acid binding	828	8e-089
AT3G11770.1 nucleic acid binding	696	2e-073

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	2			100%

Unigene Members	Member information