RadishBase

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Information for unigene UN12786

FASTA Sequence

Unigene ID: UN12786	Length: 791	SSR
GAAGGAGGAGTAAACCTGACACACCTTCACACGGACATTGTCTTGTTTGAACATCTTCTAATCTAAATAGGGTCTTTTCATCGAGG GGTACTAAGATATTATTTTATACTCTAGTCCTTACTGTGTGTGTGTGTGAGAAAGTTTCTTGGCTACTTTGACAATGGTAGCGGTG CATTTTAGCTCTGTGAAGTTGAGTAGAGGTTTCTTAGTGTGTTTATGGCTGTTGGGTATGATGTCTCTATCTTGCGCATCGAGGTA TGGCGCGTCAAGGCAGAAGCTTGAAGTTAAGAAGCACTTGAATAGGCTTAACAAACCTGCTGTTAAGAGCATTCAGAGTCCAGATG GAGATATAATAGACTGTGTTCCTATCTCAAAGCAACCAGCTTTCGACCACCCTTTCCTCAAAGATCACAAGATTCAGATGAGGCCT AGTTACCACCCTGAAGGACTCTTTGATGACAGCAAAGCATCTGCAAAGCCAAAGGAGAAGAAAGAAACCCACATCCCTCCTCAGTT GTGGCATCGCTACGGTAAATGTTCTGAAGGAACCATTCCTATGAGGAGGACAAAAGAGGATGATGTGTTGAGAGCAAGCTCTGTTA AAAGATTCGGCAAGAAGAAACATCGAACTGTTCCTATCCCTAAATCTGCTGAGCCTGACCTCATCAACCGAAATGGTCATCAGCAT GCCATAGCTTATGTGGAGGAGATAAGTATTATGGAGCTAAAGCGACTTTAAATGTGTGGGAGCAAAGATACAGCACGCAACGAGTC AGCTTGTCACAGATATG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002882828 hypothetical protein ARALYDRAFT_897583 [Arabidopsis lyrata subsp. lyrata]	846	1e-088
NP_566457 uncharacterized protein [Arabidopsis thaliana]	801	2e-083
AAM65243 putative carboxyl-terminal peptidase [Arabidopsis thaliana]	794	1e-082
XP_002894502 hypothetical protein ARALYDRAFT_474597 [Arabidopsis lyrata subsp. lyrata]	777	1e-080
NP_175933 uncharacterized protein [Arabidopsis thaliana]	776	2e-080

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q9LJE0 AT3g13510/MRP15_15	801	1e-083
Q8LAN5 Putative carboxyl-terminal peptidase	794	1e-082
Q8GUK9 Putative uncharacterized protein At1g55360	776	1e-080
Q9C8A7 At1g55360	776	1e-080
Q9LVC1 Putative uncharacterized protein At5g56530	679	2e-069

Arabidopsis top hits (Blast detail)	Score	e value
AT3G13510.1 unknown protein	801	9e-086
AT1G55360.1 unknown protein	776	7e-083
AT5G56530.1 unknown protein	679	1e-071
AT2G44210.1 unknown protein	438	1e-043
AT2G44210.2 unknown protein	376	2e-036

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	1			50%


6	1			50%

Unigene Members	Member information