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Information for unigene UN12834

FASTA Sequence
Unigene ID: UN12834Length: 793 SSR 
TCCCCACTAAGCAACTTCTTTTCAAACAAACCCATTATCTTCTGCTACTTCTTCTTCTTCTTCTTCCTCCAGATTCAGTTTGTATC
CAGGAGACAGGTCAAATTTGAGGTTCTTGTAGTGAAACTTGTACTTCTTACATCTCCATCAAATCCAAATTTAGTCTGTATCCAGG
AGTGAGTATCCTTCTCTCTGGATTTTGTGATGCGCTTTAATTGCTTTGGAGTTCTTGATAAGTGCAAAAGAAATGATCGTCTTGGT
CAGAAAGAAGCTGAAGAGATTTGCACCGACAATGTGGGAGTCTTTTCATATAACTCATTAAGATCAGCCACGGATGATTTTCATCC
ATCTACCAGAATCGGAGGTGGTGGTTTTGGCATTGTCTACAGGGGAGTATTGAGAGATGGTACACAAGTAGCTGTGAAATTACTTT
CAGCAGAATCTAAACAAGGCACACGAGAGTTCTTGACCGAGATTAACTTGATATCCAAGATTTATCATCCTAACCTTGTTAACCTC
ATTGGCTGCTGCGTCGAAGGGAACAATCGGATTCTCGTCTACGAGTACCTTGAGAACAACAGTCTTGCTAGTGTTTTGCTTGGTTC
GAGTAGTAAGTATGTTCCACTTGATTGGCCCAAAAGAGCTGCCATTTGCGTTGGGACAGCTTCAGGTTTAGCTTTCCTTCACGAAG
AAGTCGAACCTCAGGTCGTTCACCGCGACATAAAGGCCAGTAACATCTTACTAGACCAAAACTTTTGTCCCAAGATTGGAGATTTT
GGGCTGGCGAAGCTTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882598 kinase family protein [Arabidopsis lyrata subsp. lyrata]9042e-095
NP_566341 protein kinase domain-containing protein [Arabidopsis thaliana]9024e-095
AAF07841 putative protein kinase [Arabidopsis thaliana]8523e-089
AAD56317 putative receptor ser/thr protein kinase [Arabidopsis thaliana]8523e-089
XP_002274657 PREDICTED: hypothetical protein [Vitis vinifera]7968e-083

Swiss-Prot top hits (Blast detail)Scoree value
C0LGG8 Probable LRR receptor-like serine/threonine-protein kinase At1g534305097e-051
C0LGG9 Probable LRR receptor-like serine/threonine-protein kinase At1g534405089e-051
C0LGG7 Probable LRR receptor-like serine/threonine-protein kinase At1g534205071e-050
Q9FXF2 Probable LRR receptor-like serine/threonine-protein kinase RFK15043e-050
C0LGH3 Probable LRR receptor-like serine/threonine-protein kinase At1g561404882e-048

TrEMBL top hits (Blast detail)Scoree value
Q8LF75 Putative receptor ser thr protein kinase9023e-095
Q9SR98 Putative uncharacterized protein T16O11.38522e-089
Q9SS84 Putative receptor ser/thr protein kinase8522e-089
B9IG83 Predicted protein7321e-075
C5WQ58 Putative uncharacterized protein Sb01g0401906399e-065

Arabidopsis top hits (Blast detail)Scoree value
AT3G09010.1 protein kinase family protein9022e-097
AT3G14840.2 leucine-rich repeat family protein / protein kinase family protein5293e-054
AT1G53430.1 leucine-rich repeat family protein / protein kinase family protein5097e-052
AT1G53430.2 leucine-rich repeat family protein / protein kinase family protein5097e-052
AT1G53440.1 leucine-rich repeat family protein / protein kinase family protein5089e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
61  50%

Unigene MembersMember information